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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000214.1-P
Bra000737.1-P
Bra002368.1-P
Bra002766.1-P
Bra003633.1-P
Bra006595.1-P
Bra008385.1-P
Bra011404.1-P
Bra012223.1-P
Bra015797.1-P
Bra016752.1-P
Bra017504.1-P
Bra018296.1-P
Bra019792.1-P
Bra022104.1-P
Bra023148.1-P
Bra024899.1-P
Bra025613.1-P
Bra025804.1-P
Bra026951.1-P
Bra028949.1-P
Bra033155.1-P
Bra033467.1-P
Bra034543.1-P
Bra035074.1-P
Bra035248.1-P
Bra037030.1-P
Bra038621.1-P
Bra039723.1-P
Bra039871.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G35410.1 Bra016752.1-P AT1G12840.1 17875927
AT5G35410.1 Bra019792.1-P AT1G12840.1 17875927
AT5G35410.1 Bra026951.1-P AT1G12840.1 17875927
AT5G35410.1 Bra012223.1-P AT1G20260.1 17875927
AT5G35410.1 Bra025804.1-P AT1G20260.1 17875927
AT5G35410.1 Bra023148.1-P AT1G30860.1 21798944
AT5G35410.1 Bra039871.1-P AT1G30860.1 21798944
AT5G35410.1 Bra015797.1-P AT1G76030.1 17875927
AT5G35410.1 Bra003633.1-P AT1G78900.1 17875927
AT5G35410.1 Bra008385.1-P AT1G78900.1 17875927
AT5G35410.1 Bra035074.1-P AT1G78900.1 17875927
AT5G35410.1 Bra024899.1-P AT2G01190.1 21798944
AT5G35410.1 Bra000214.1-P AT2G41090.1 17360592
AT5G35410.1 Bra000214.1-P AT2G41100.1 17360592
AT5G35410.1 Bra018296.1-P AT3G51920.1 17360592
AT5G35410.1 Bra033467.1-P AT3G51920.1 17360592
AT5G35410.1 Bra000737.1-P AT4G11150.1 17875927
AT5G35410.1 Bra033155.1-P AT4G11150.1 17875927
AT5G35410.1 Bra035248.1-P AT4G11150.1 17875927
AT5G35410.1 Bra039723.1-P AT4G14640.1 17360592
AT5G35410.1 Bra011404.1-P AT4G33000.1 17449811
AT5G35410.1 Bra034543.1-P AT4G33000.1 17449811
AT5G35410.1 Bra037030.1-P AT4G33000.1 17449811
AT5G35410.1 Bra011404.1-P AT4G33000.1 17825054
AT5G35410.1 Bra034543.1-P AT4G33000.1 17825054
AT5G35410.1 Bra037030.1-P AT4G33000.1 17825054
AT5G35410.1 Bra011404.1-P AT4G33000.1 19448033
AT5G35410.1 Bra034543.1-P AT4G33000.1 19448033
AT5G35410.1 Bra037030.1-P AT4G33000.1 19448033
AT5G35410.1 Bra002368.1-P AT5G21274.1 17360592
AT5G35410.1 Bra006595.1-P AT5G21274.1 17360592
AT5G35410.1 Bra025613.1-P AT5G35410.1 11402167
AT5G35410.1 Bra017504.1-P AT5G47100.1 14730064
AT5G35410.1 Bra022104.1-P AT5G47100.1 14730064
AT5G35410.1 Bra028949.1-P AT5G55990.1 11402167
AT5G35410.1 Bra002766.1-P AT5G57050.1 14504388
AT5G35410.1 Bra038621.1-P AT5G63310.1 17785451
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44603 Canola cytosol 99.56 99.56
AT5G35410.1 Thale cress cytosol 87.86 89.24
VIT_11s0016g05420.t01 Wine grape cytosol 72.41 73.54
PGSC0003DMT400007475 Potato cytosol 71.96 73.09
Solyc12g009570.1.1 Tomato cytosol 71.08 72.2
KRH03685 Soybean cytosol 69.54 70.63
KRH20252 Soybean cytosol 68.65 69.73
EER90021 Sorghum cytosol 67.11 67.71
TraesCS7A01G377600.1 Wheat mitochondrion 65.34 66.37
Zm00001d000407_P001 Maize plastid 66.0 66.15
Zm00001d036879_P001 Maize cytosol, mitochondrion 65.34 65.92
TraesCS7D01G374400.2 Wheat mitochondrion 64.9 65.92
TraesCS7B01G279300.1 Wheat mitochondrion 64.9 65.92
Os06t0606000-01 Rice cytosol 65.12 65.12
GSMUA_Achr10P... Banana cytosol 67.11 63.87
Bra013799.1-P Field mustard cytosol 55.41 60.19
HORVU7Hr1G090260.14 Barley cytosol 66.0 59.21
Bra002369.1-P Field mustard cytosol 54.97 56.46
Bra034315.1-P Field mustard cytosol, mitochondrion 52.98 54.55
Bra032374.1-P Field mustard plastid 55.41 53.75
Bra020156.1-P Field mustard cytosol 52.32 53.74
Bra014875.1-P Field mustard plastid 55.41 52.4
Bra032622.1-P Field mustard cytosol 50.99 51.91
Bra010783.1-P Field mustard plastid 52.1 51.87
Bra033282.1-P Field mustard cytosol 49.89 46.89
Bra014124.1-P Field mustard cytosol 42.6 46.17
Bra001665.1-P Field mustard cytosol 44.15 45.15
Bra002712.1-P Field mustard cytosol 39.96 44.8
Bra006809.1-P Field mustard cytosol 37.09 43.52
Bra022219.1-P Field mustard cytosol 42.6 43.27
Bra032246.1-P Field mustard cytosol 39.29 39.91
Bra001022.1-P Field mustard cytosol 32.45 29.34
Bra028245.1-P Field mustard cytosol 31.35 28.74
Bra039146.1-P Field mustard cytosol 31.79 28.46
Bra025379.1-P Field mustard cytosol 31.35 27.73
Bra033088.1-P Field mustard cytosol 29.14 26.88
Bra021482.1-P Field mustard cytosol 32.23 22.88
Bra001021.1-P Field mustard plasma membrane 0.22 0.14
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3MapMan:26.6.1.1.2Gene3D:3.30.200.20Gene3D:3.30.310.80EnsemblPlantsGene:Bra025613EnsemblPlants:Bra025613.1
EnsemblPlants:Bra025613.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005773GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009628GO:GO:0009651GO:GO:0009705GO:GO:0009987
GO:GO:0016020GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR018451InterPro:Kinase-like_dom_sfUniProt:M4EA06InterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069
PFAM:PF03822PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50816
PANTHER:PTHR24343PANTHER:PTHR24343:SF157InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI0002544D0DSEG:seg:::
Description
AT5G35410 (E=4e-233) SOS2, SnRK3.11, CIPK24 | SOS2 (SALT OVERLY SENSITIVE 2); kinase/ protein kinase
Coordinates
chrA04:-:7487283..7490146
Molecular Weight (calculated)
51603.6 Da
IEP (calculated)
9.524
GRAVY (calculated)
-0.267
Length
453 amino acids
Sequence
(BLAST)
001: MDQKKRITTK KTRKLGKYEV GRTIGEGSFA KVKFARNTDT GENVAIKIMA KSTILKNKMA DQIKREISIM KIVRHPNMVR LYEVLASPSK IYIVLEFVTG
101: GELFDRIVHK GRLEESEARK YFQQLIDAIA HCHCKGVYHR DLKPENLLLD NNGNLKVSDF GLSALPEQGV ELLRTTCGTP NYAAPEVLNG QGYDGSAADI
201: WSCGVILFVI MAGFLPFSET DLPSLYRKIS AAEFSCPQWF SADVKSLIQR ILDPNPNTRI QIQGIRKHSW FRINYMPTRA KEEEEVNLDD VRAVFDGIEG
301: SYVAENIERR YEGPLMMNAF EMITLSQGLN LSALFDRRQD FVKRQTRFVS RREPSVIIAN IEAVATSMGF RAHTRNFKTR LEGLSSIKAG QFAVVIEVYE
401: VAPSLFMVDV RKAAGETLEY HKFYKKLCEK LENIIWRATE GMPKPELFRT ITF
Best Arabidopsis Sequence Match ( AT5G35410.1 )
(BLAST)
001: MTKKMRRVGK YEVGRTIGEG TFAKVKFARN TDTGDNVAIK IMAKSTILKN RMVDQIKREI SIMKIVRHPN IVRLYEVLAS PSKIYIVLEF VTGGELFDRI
101: VHKGRLEESE SRKYFQQLVD AVAHCHCKGV YHRDLKPENL LLDTNGNLKV SDFGLSALPQ EGVELLRTTC GTPNYVAPEV LSGQGYDGSA ADIWSCGVIL
201: FVILAGYLPF SETDLPGLYR KINAAEFSCP PWFSAEVKFL IHRILDPNPK TRIQIQGIKK DPWFRLNYVP IRAREEEEVN LDDIRAVFDG IEGSYVAENV
301: ERNDEGPLMM NAFEMITLSQ GLNLSALFDR RQDFVKRQTR FVSRREPSEI IANIEAVANS MGFKSHTRNF KTRLEGLSSI KAGQLAVVIE IYEVAPSLFM
401: VDVRKAAGET LEYHKFYKKL CSKLENIIWR ATEGIPKSEI LRTITF
Arabidopsis Description
CIPK24Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UB05]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.