Factsheet for Bra003633.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57944	Canola	cytosol	100.0	100.0
Bra008385.1-P	Field mustard	cytosol	93.74	99.32
Bra035074.1-P	Field mustard	cytosol	98.72	98.72
AT1G78900.1	Thale cress	cytosol	97.75	97.75
VIT_09s0054g00890.t01	Wine grape	extracellular	94.22	94.22
PGSC0003DMT400068136	Potato	cytosol	94.22	94.22
KRH46991	Soybean	nucleus	94.22	94.22
Solyc06g063330.2.1	Tomato	cytosol, unclear	94.06	94.06
KRH44667	Soybean	nucleus	94.06	94.06
Solyc12g055800.1.1	Tomato	plastid	93.9	93.9
PGSC0003DMT400074197	Potato	cytosol	93.58	93.58
EES04615	Sorghum	cytosol	91.81	92.11
Zm00001d053765_P003	Maize	cytosol	91.49	91.79
EER90164	Sorghum	cytosol	91.49	91.79
Zm00001d015426_P001	Maize	cytosol	74.0	91.65
GSMUA_Achr1P10520_001	Banana	plasma membrane	90.85	91.14
GSMUA_Achr11P...	Banana	cytosol	90.69	90.98
GSMUA_Achr9P23040_001	Banana	cytosol	90.53	90.82
Os06t0662000-01	Rice	nucleus, plasma membrane	90.37	90.81
TraesCS7D01G475900.2	Wheat	cytosol	88.76	89.92
TraesCS7A01G489500.1	Wheat	plastid	88.76	89.92
HORVU6Hr1G069640.1	Barley	cytosol, mitochondrion	8.51	89.83
Os02t0175400-01	Rice	plasma membrane	88.92	89.21
TraesCS7B01G392600.1	Wheat	plastid	89.41	82.15
Zm00001d015427_P001	Maize	extracellular, plastid	15.41	80.0
HORVU7Hr1G109770.1	Barley	cytosol, mitochondrion	83.79	64.84
Bra025804.1-P	Field mustard	cytosol	17.98	27.72
Bra015797.1-P	Field mustard	cytosol	20.06	25.61
Bra012223.1-P	Field mustard	endoplasmic reticulum	18.62	24.63
Bra009363.1-P	Field mustard	mitochondrion	19.58	21.98
Bra028648.1-P	Field mustard	mitochondrion	19.58	21.98
Bra006013.1-P	Field mustard	mitochondrion	19.42	21.84
Bra009360.1-P	Field mustard	mitochondrion	19.26	21.7
Bra028649.1-P	Field mustard	mitochondrion	19.42	21.45
Bra006014.1-P	Field mustard	mitochondrion	19.58	16.53
Bra005634.1-P	Field mustard	cytosol	3.53	14.47

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:2.40.30.20	Gene3D:2.40.50.100	MapMan:24.1.1.2.1
Gene3D:3.40.50.300	InterPro:ATP-synth_a_Xtn	InterPro:ATP_synth_asu-like_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd
InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_V1-cplx_asu	InterPro:ATPase_a/bsu_AS	EnsemblPlantsGene:Bra003633	EnsemblPlants:Bra003633.1	EnsemblPlants:Bra003633.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0015991	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787	GO:GO:0033180	GO:GO:0046034
GO:GO:0046961	GO:GO:1902600	InterPro:IPR023366	InterPro:IPR024034	UniProt:M4CHF0	HAMAP:MF_00309
InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PFAM:PF16886	ScanProsite:PS00152	PANTHER:PTHR43607
PANTHER:PTHR43607:SF3	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01042	UniParc:UPI00025413F1
InterPro:V-ATPase_asu	SEG:seg	:	:	:	:

Description

AT1G78900 (E=0.0) VHA-A | VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A); ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism

Coordinates

chrA07:-:14162824..14166703

Molecular Weight (calculated)

68674.1 Da

IEP (calculated)

4.915

GRAVY (calculated)

-0.178

Length

623 amino acids

Sequence
(BLAST)

001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIAKRSGDVY IPRGVSVPAL DKDCPWEFQP NDFVEGDTIT GGDLYATVFE NTLMTHRVAL PPDAMGKITY IAPAGQYSLK DTVLELEFQG
201: VKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERDGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEAAL
601: VAKFKKLYED LSAGFRALED ETR

Best Arabidopsis Sequence Match ( AT1G78900.1 )
(BLAST)

001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIARISGDVY IPRGVSVPAL DKDCLWEFQP NKFVEGDTIT GGDLYATVFE NTLMNHLVAL PPDAMGKITY IAPAGQYSLK DTVIELEFQG
201: IKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERNGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEDTL
601: VEKFKKLYDD LNAGFRALED ETR

Arabidopsis Description

VHA-AVHA-A [Source:UniProtKB/TrEMBL;Acc:A0A178W720]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.