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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • vacuole 1
  • mitochondrion 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plasma membrane, vacuole
BaCelLo:cytosol
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:mitochondrion, plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g055800.1.1 Tomato plastid 99.52 99.52
PGSC0003DMT400068136 Potato cytosol 96.63 96.63
KRH46991 Soybean nucleus 94.22 94.22
KRH44667 Soybean nucleus 93.9 93.9
Bra003633.1-P Field mustard cytosol 93.58 93.58
CDY57944 Canola cytosol 93.58 93.58
CDX79274 Canola cytosol 93.58 93.58
AT1G78900.1 Thale cress cytosol 93.42 93.42
GSMUA_Achr11P... Banana cytosol 93.1 93.4
VIT_04s0008g02580.t01 Wine grape cytosol 94.54 93.34
CDX87424 Canola cytosol 93.1 93.1
CDX88489 Canola cytosol 93.1 93.1
Bra008385.1-P Field mustard cytosol 87.8 93.03
Bra035074.1-P Field mustard cytosol 92.78 92.78
EER90164 Sorghum cytosol 92.46 92.75
GSMUA_Achr1P10520_001 Banana plasma membrane 92.46 92.75
CDY67023 Canola cytosol 75.44 92.7
Zm00001d015426_P001 Maize cytosol 74.8 92.64
EES04615 Sorghum cytosol 91.97 92.27
GSMUA_Achr9P23040_001 Banana cytosol 91.97 92.27
Zm00001d053765_P003 Maize cytosol 91.65 91.95
Os06t0662000-01 Rice nucleus, plasma membrane 91.49 91.94
TraesCS7A01G489500.1 Wheat plastid 88.92 90.08
TraesCS7D01G475900.2 Wheat cytosol 88.92 90.08
Os02t0175400-01 Rice plasma membrane 89.57 89.86
HORVU6Hr1G069640.1 Barley cytosol, mitochondrion 8.35 88.14
TraesCS7B01G392600.1 Wheat plastid 89.25 82.01
Zm00001d015427_P001 Maize extracellular, plastid 15.25 79.17
HORVU7Hr1G109770.1 Barley cytosol, mitochondrion 83.79 64.84
PGSC0003DMT400068704 Potato cytosol 19.74 25.68
PGSC0003DMT400008800 Potato cytosol 19.9 23.66
PGSC0003DMT400078610 Potato mitochondrion 20.55 23.23
PGSC0003DMT400078507 Potato cytosol 20.55 23.02
PGSC0003DMT400015365 Potato mitochondrion 20.22 22.42
PGSC0003DMT400002642 Potato cytosol 12.52 19.12
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14Gene3D:1.10.1140.10EntrezGene:102591413Gene3D:2.40.30.20Gene3D:2.40.50.100
MapMan:24.1.1.2.1Gene3D:3.40.50.300InterPro:ATP-synth_a_XtnInterPro:ATP_synth_asu-like_sfInterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_N_sf
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_F1/V1_b/a_CInterPro:ATPase_V1-cplx_asuInterPro:ATPase_a/bsu_ASGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006139
GO:GO:0006810GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0015991GO:GO:0015992
GO:GO:0016020GO:GO:0016787GO:GO:0033180GO:GO:0046034GO:GO:0046961GO:GO:1902600
InterPro:IPR023366InterPro:IPR024034UniProt:M1CTC4HAMAP:MF_00309InterPro:P-loop_NTPasePFAM:PF00006
PFAM:PF02874PFAM:PF16886EnsemblPlantsGene:PGSC0003DMG400028839PGSC:PGSC0003DMG400028839EnsemblPlants:PGSC0003DMT400074197ScanProsite:PS00152
PANTHER:PTHR43607PANTHER:PTHR43607:SF3SUPFAM:SSF47917SUPFAM:SSF50615SUPFAM:SSF52540TIGRFAMs:TIGR01042
UniParc:UPI000296C030InterPro:V-ATPase_asuRefSeq:XP_006362109.1:::
Description
Vacuolar H+-ATPase A1 subunit isoform [Source:PGSC_GENE;Acc:PGSC0003DMG400028839]
Coordinates
chr12:-:53317485..53327184
Molecular Weight (calculated)
68641.4 Da
IEP (calculated)
5.026
GRAVY (calculated)
-0.168
Length
623 amino acids
Sequence
(BLAST)
001: MPSIFGGPMT TFEDSEKESE YGYVRKVSGP VVVADGMGGA AMYELVRVGH DKLIGEIIRL EGDSATIQVY EETAGLMVND PVLRTRKPLS VELGPGILGN
101: IFDGIQRPLK TIAKRSGDVY IPRGVSVPAL DKDILWEFQP KKIGEGDLLT GGDLYATVFE NSLMEHRVAL PPDAMGKITY IAPAGQYSLN DTVLELEFQG
201: VKKQVTMLQT WPVRSPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDTVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERTGSVTIV GAVSPPGGDF SDPVTSATLG IVQVFWGLDK KLAQRKHFPS VNWLISYSKY SGALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAETDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMLRNIIHF YNLANQAVER GAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEDVL
601: VGKFQKLHDD LVAGFRNLED ETR
Best Arabidopsis Sequence Match ( AT1G78900.1 )
(BLAST)
001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIARISGDVY IPRGVSVPAL DKDCLWEFQP NKFVEGDTIT GGDLYATVFE NTLMNHLVAL PPDAMGKITY IAPAGQYSLK DTVIELEFQG
201: IKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERNGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEDTL
601: VEKFKKLYDD LNAGFRALED ETR
Arabidopsis Description
VHA-AVHA-A [Source:UniProtKB/TrEMBL;Acc:A0A178W720]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.