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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • vacuole 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87424 Canola cytosol 99.68 99.68
CDX88489 Canola cytosol 99.68 99.68
Bra003633.1-P Field mustard cytosol 98.72 98.72
Bra008385.1-P Field mustard cytosol 92.78 98.3
AT1G78900.1 Thale cress cytosol 96.95 96.95
VIT_09s0054g00890.t01 Wine grape extracellular 93.74 93.74
KRH46991 Soybean nucleus 93.74 93.74
PGSC0003DMT400068136 Potato cytosol 93.58 93.58
KRH44667 Soybean nucleus 93.58 93.58
Solyc06g063330.2.1 Tomato cytosol, unclear 93.42 93.42
Solyc12g055800.1.1 Tomato plastid 93.1 93.1
PGSC0003DMT400074197 Potato cytosol 92.78 92.78
EES04615 Sorghum cytosol 91.33 91.63
Zm00001d053765_P003 Maize cytosol 91.01 91.3
EER90164 Sorghum cytosol 91.01 91.3
Zm00001d015426_P001 Maize cytosol 73.52 91.05
GSMUA_Achr1P10520_001 Banana plasma membrane 90.53 90.82
GSMUA_Achr11P... Banana cytosol 90.37 90.66
Os06t0662000-01 Rice nucleus, plasma membrane 90.21 90.65
GSMUA_Achr9P23040_001 Banana cytosol 90.05 90.34
HORVU6Hr1G069640.1 Barley cytosol, mitochondrion 8.51 89.83
TraesCS7D01G475900.2 Wheat cytosol 87.96 89.11
TraesCS7A01G489500.1 Wheat plastid 87.96 89.11
Os02t0175400-01 Rice plasma membrane 88.28 88.57
TraesCS7B01G392600.1 Wheat plastid 88.6 81.42
Zm00001d015427_P001 Maize extracellular, plastid 15.41 80.0
HORVU7Hr1G109770.1 Barley cytosol, mitochondrion 82.99 64.22
Bra025804.1-P Field mustard cytosol 17.98 27.72
Bra015797.1-P Field mustard cytosol 20.06 25.61
Bra012223.1-P Field mustard endoplasmic reticulum 18.62 24.63
Bra028648.1-P Field mustard mitochondrion 19.42 21.8
Bra009363.1-P Field mustard mitochondrion 19.42 21.8
Bra006013.1-P Field mustard mitochondrion 19.26 21.66
Bra009360.1-P Field mustard mitochondrion 19.1 21.52
Bra028649.1-P Field mustard mitochondrion 19.26 21.28
Bra006014.1-P Field mustard mitochondrion 19.42 16.4
Bra005634.1-P Field mustard cytosol 3.53 14.47
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14Gene3D:1.10.1140.10Gene3D:2.40.30.20Gene3D:2.40.50.100MapMan:24.1.1.2.1
Gene3D:3.40.50.300InterPro:ATP-synth_a_XtnInterPro:ATP_synth_asu-like_sfInterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_N_sfInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd
InterPro:ATPase_F1/V1_b/a_CInterPro:ATPase_V1-cplx_asuInterPro:ATPase_a/bsu_ASEnsemblPlantsGene:Bra035074EnsemblPlants:Bra035074.1EnsemblPlants:Bra035074.1-P
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006139GO:GO:0006810GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0015991GO:GO:0015992GO:GO:0016020GO:GO:0016787GO:GO:0033180GO:GO:0046034
GO:GO:0046961GO:GO:1902600InterPro:IPR023366InterPro:IPR024034UniProt:M4F1X7HAMAP:MF_00309
InterPro:P-loop_NTPasePFAM:PF00006PFAM:PF02874PFAM:PF16886ScanProsite:PS00152PANTHER:PTHR43607
PANTHER:PTHR43607:SF3SUPFAM:SSF47917SUPFAM:SSF50615SUPFAM:SSF52540TIGRFAMs:TIGR01042UniParc:UPI0002541C6D
InterPro:V-ATPase_asuSEG:seg::::
Description
AT1G78900 (E=0.0) VHA-A | VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A); ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism
Coordinates
chrA07:+:22036856..22040499
Molecular Weight (calculated)
68725.2 Da
IEP (calculated)
4.865
GRAVY (calculated)
-0.178
Length
623 amino acids
Sequence
(BLAST)
001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGN DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIAKRSGDVY IPRGVSVPAL DKDCLWEFQP NDFVEGDTIT GGDLYATVFE NTLMTHRVAL PPDTMGKITY LAPAGQYSLK DTVLELEFQG
201: VKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGMNVSMM ADSTSRWAET LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERDGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQSVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEAAL
601: VAKFKKLYED LTAGFRALED ETR
Best Arabidopsis Sequence Match ( AT1G78900.1 )
(BLAST)
001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIARISGDVY IPRGVSVPAL DKDCLWEFQP NKFVEGDTIT GGDLYATVFE NTLMNHLVAL PPDAMGKITY IAPAGQYSLK DTVIELEFQG
201: IKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERNGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEDTL
601: VEKFKKLYDD LNAGFRALED ETR
Arabidopsis Description
VHA-AVHA-A [Source:UniProtKB/TrEMBL;Acc:A0A178W720]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.