Factsheet for TraesCS7A01G489500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G475900.2	Wheat	cytosol	100.0	100.0
Zm00001d015426_P001	Maize	cytosol	75.45	92.25
EES04615	Sorghum	cytosol	93.01	92.11
Os02t0175400-01	Rice	plasma membrane	91.87	90.98
GSMUA_Achr11P...	Banana	cytosol	91.38	90.5
GSMUA_Achr1P10520_001	Banana	plasma membrane	91.38	90.5
TraesCS7B01G392600.1	Wheat	plastid	99.67	90.41
GSMUA_Achr9P23040_001	Banana	cytosol	91.06	90.18
Bra008385.1-P	Field mustard	cytosol	85.2	89.12
AT1G78900.1	Thale cress	cytosol	90.24	89.09
PGSC0003DMT400074197	Potato	cytosol	90.08	88.92
Solyc12g055800.1.1	Tomato	plastid	90.08	88.92
KRH46991	Soybean	nucleus	90.08	88.92
VIT_09s0054g00890.t01	Wine grape	extracellular	89.92	88.76
Bra003633.1-P	Field mustard	cytosol	89.92	88.76
KRH44667	Soybean	nucleus	89.59	88.44
PGSC0003DMT400068136	Potato	cytosol	89.43	88.28
Solyc06g063330.2.1	Tomato	cytosol, unclear	89.11	87.96
Bra035074.1-P	Field mustard	cytosol	89.11	87.96
VIT_04s0008g02580.t01	Wine grape	cytosol	89.43	87.16
HORVU7Hr1G109770.1	Barley	cytosol, mitochondrion	91.71	70.06
CDX77882	Canola	mitochondrion	11.87	33.8
TraesCS4A01G151900.1	Wheat	cytosol, mitochondrion, plastid	6.02	28.46
TraesCS7A01G362000.1	Wheat	cytosol	20.33	25.61
TraesCS3A01G250500.1	Wheat	extracellular	20.16	25.41
TraesCS6A01G186300.1	Wheat	cytosol	20.16	25.41
TraesCS3A01G264700.1	Wheat	mitochondrion	20.49	22.87
TraesCS1A01G379000.1	Wheat	mitochondrion	20.0	22.24

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:2.40.30.20	Gene3D:2.40.50.100	MapMan:24.1.1.2.1
Gene3D:3.40.50.300	InterPro:ATP-synth_a_Xtn	InterPro:ATP_synth_asu-like_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd
InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_V1-cplx_asu	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006139	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015991	GO:GO:0016020	GO:GO:0016787
GO:GO:0033180	GO:GO:0046034	GO:GO:0046961	GO:GO:1902600	InterPro:IPR023366	InterPro:IPR024034
HAMAP:MF_00309	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PFAM:PF16886	ScanProsite:PS00152
PANTHER:PTHR43607	PANTHER:PTHR43607:SF3	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01042
EnsemblPlantsGene:TraesCS7A01G489500	EnsemblPlants:TraesCS7A01G489500.1	InterPro:V-ATPase_asu	TIGR:cd01134	:	:

Description

No Description!

Coordinates

chr7A:+:679750948..679756984

Molecular Weight (calculated)

67791.0 Da

IEP (calculated)

4.952

GRAVY (calculated)

-0.207

Length

615 amino acids

Sequence
(BLAST)

001: MTTFEEGERE SEYGYVRKVS GPVVVADGMG GAAMYELVRV GHDSLIGEII RLEGDSATIQ VYEETAGLTV NDPVLRTKKP LSCELGPGIL GNIFDGIQRP
101: LKTIAIKSGD VYIPRGVSVP ALDKDQQWEF QPNKLGVGDN ITNGDLYATV FENTLMKHHI ALPPGAMGKI SYIAPAGQYS LQDTVLELEF QGIKKEFTML
201: HTWPVRTPRP VASKLAADTP LLTGQRVLDA LFPSVLGGTC AIPGAFGCGK TVISQALSKY SNSDTVVYVG CGERGNEMAE VLMDFPQLTM TLPDGREESV
301: MKRTTLVANT SNMPVAAREA SIYTGITIAE YFRDMGYNVS MMADSTSRWA EALREISGRL AEMPADSGYP AYLASRLASF YERAGKVQCL GSPDRTGSVT
401: IVGAVSPPGG DFSDPVTSAT LSIVQVFWGL DKKLAQRKHF PSVNWLISYS KYSTALEGYY EKFDPGFIDM RTKAREVLQR EDDLNEIVQL VGKDALGESD
501: KITLETAKLL REDYLAQNAF TPYDKYCPFY KSVWMMRNII HFNTLANQAV ERAANADGHK ITYAVVKSRM GDLFYRLVSQ KFEDPAEGED VLIAKFQKLY
601: DDLTTGFRNL EDEAR

Best Arabidopsis Sequence Match ( AT1G78900.1 )
(BLAST)

001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIARISGDVY IPRGVSVPAL DKDCLWEFQP NKFVEGDTIT GGDLYATVFE NTLMNHLVAL PPDAMGKITY IAPAGQYSLK DTVIELEFQG
201: IKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERNGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEDTL
601: VEKFKKLYDD LNAGFRALED ETR

Arabidopsis Description

VHA-AVHA-A [Source:UniProtKB/TrEMBL;Acc:A0A178W720]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.