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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
 plastid: 22160430
unclear: 25769308
mitochondrion: 26136264
nucleus: 26228564
msms PMID: 22160430 doi
AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo
Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID: 26228564 doi
E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
msms PMID: 26136264 doi
S Wang, G Zhang, Y Zhang, Q Song, Z Chen, J Wang, J Guo, N Niu, J Wang, S Ma
College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G298000.1 Wheat mitochondrion 99.82 99.82
TraesCS3D01G264800.2 Wheat golgi 99.64 99.46
Zm00001d038929_P001 Maize mitochondrion 94.19 93.85
TraesCS1A01G379000.1 Wheat mitochondrion 93.28 92.95
Os05t0553000-02 Rice mitochondrion 92.01 91.85
Zm00001d043834_P001 Maize mitochondrion 94.56 91.56
CDX69928 Canola cytosol 73.32 89.98
CDY21559 Canola cytosol 73.32 89.98
CDY44784 Canola cytosol 73.32 89.98
KRH35827 Soybean nucleus 86.75 85.51
KRG90945 Soybean mitochondrion 86.39 85.15
Bra009363.1-P Field mustard mitochondrion 83.3 82.7
CDX69929 Canola mitochondrion 83.12 82.67
CDY21558 Canola mitochondrion 82.76 82.46
CDY44783 Canola mitochondrion 82.76 82.46
CDX81119 Canola mitochondrion 83.12 82.37
CDX78350 Canola mitochondrion 82.76 82.31
AT5G08680.1 Thale cress mitochondrion 83.48 82.29
CDX78351 Canola mitochondrion 82.94 82.19
CDX81118 Canola mitochondrion 82.76 82.16
AT5G08690.1 Thale cress mitochondrion 82.76 82.01
AT5G08670.1 Thale cress mitochondrion 82.76 82.01
Bra006013.1-P Field mustard mitochondrion 82.4 81.95
Bra009360.1-P Field mustard mitochondrion 82.21 81.92
CDY40737 Canola mitochondrion 82.4 81.8
CDY40736 Canola cytosol 82.4 81.8
Bra028648.1-P Field mustard mitochondrion 82.03 81.44
Bra028649.1-P Field mustard mitochondrion 80.22 78.37
TraesCS4A01G151900.1 Wheat cytosol, mitochondrion, plastid 17.06 72.31
Bra006014.1-P Field mustard mitochondrion 82.76 61.79
TraesCS3A01G250500.1 Wheat extracellular 18.15 20.49
TraesCS7A01G489500.1 Wheat plastid 22.87 20.49
TraesCS6A01G186300.1 Wheat cytosol 17.97 20.29
TraesCS7A01G362000.1 Wheat cytosol 17.79 20.08
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14Gene3D:1.10.1140.10MapMan:2.4.6.2.2Gene3D:2.40.10.170Gene3D:3.40.50.300
InterPro:AAA+_ATPaseInterPro:ATP_synth_F1_beta_suInterPro:ATP_synth_F1_bsuInterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_N_sfInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd
InterPro:ATPase_F1/V1_b/a_CInterPro:ATPase_a/bsu_ASncoils:CoilGO:GO:0000166GO:GO:0000275GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006139GO:GO:0006754GO:GO:0006810
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0015986GO:GO:0016020
GO:GO:0016787GO:GO:0016887GO:GO:0045261GO:GO:0046034GO:GO:0046933GO:GO:1902600
InterPro:IPR024034HAMAP:MF_01347InterPro:P-loop_NTPasePFAM:PF00006PFAM:PF02874PFAM:PF11421
PIRSF:PIRSF039072ScanProsite:PS00152PANTHER:PTHR15184PANTHER:PTHR15184:SF44SMART:SM00382SUPFAM:SSF47917
SUPFAM:SSF50615SUPFAM:SSF52540TIGRFAMs:TIGR01039EnsemblPlantsGene:TraesCS3A01G264700EnsemblPlants:TraesCS3A01G264700.1TIGR:cd01133
SEG:seg:::::
Description
No Description!
Coordinates
chr3A:-:488720771..488724905
Molecular Weight (calculated)
58934.6 Da
IEP (calculated)
6.157
GRAVY (calculated)
-0.067
Length
551 amino acids
Sequence
(BLAST)
001: MATRRAISSV LRTASRIRAA SPSPCPRAPL HRPSPAGFLL NRAAAYSSSA AAQAAPVTPP PTSDKHTGTK ITDDFTGAGA VGEVCQVIGA VVDVRFDEGL
101: PPILTALEVL DNSIRLVLEV AQHLGENVVR TIAMDGTEGL VRGQRVLNTG SPITVPVGRA TLGRIINVIG EPIDHKGDIK TNSYLPIHRE APAFVEQATE
201: QQILVTGIKV VDLLAPYQRG GKIGLFGGAG VGKTVLIMEL INNVAKAHGG FSVFAGVGER TREGNDLYRE MIESGVIKLD DKQSESKCAL VYGQMNEPPG
301: ARARVGLTGL TVAEHFRDAE GQDVLLFIDN IFRFTQANSE VSALLGRIPS AVGYQPTLAT DLGGLQERIT TTKKGSITSV QAIYVPADDL TDPAPATTFA
401: HLDATTVLSR QISELGIYPA VDPLDSTSRM LSPHVLGEAH YNTARGVQKV LQNYKNLQDI IAILGMDELS EDDKLTVARA RKIQRFLSQP FHVAEVFTGA
501: PGKYVELKEG VQSFQGVLDG KYDDLSEQAF YMVGGIEEVI AKAEKIAKEN A
Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)
001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA
Arabidopsis Description
ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.