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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69928 Canola cytosol 100.0 100.0
CDY21559 Canola cytosol 100.0 100.0
GSMUA_Achr1P12870_001 Banana cytosol 87.08 93.32
TraesCS1B01G400300.1 Wheat cytosol 83.96 84.34
GSMUA_Achr1P20900_001 Banana mitochondrion, peroxisome, plastid 10.69 84.21
CDY44783 Canola mitochondrion 100.0 81.19
CDY21558 Canola mitochondrion 100.0 81.19
CDX78350 Canola mitochondrion 100.0 81.05
CDX69929 Canola mitochondrion 100.0 81.05
CDY40737 Canola mitochondrion 100.0 80.9
CDX81118 Canola mitochondrion 100.0 80.9
CDY40736 Canola cytosol 100.0 80.9
CDX78351 Canola mitochondrion 100.0 80.76
CDX81119 Canola mitochondrion 100.0 80.76
AT5G08670.1 Thale cress mitochondrion 99.11 80.04
AT5G08690.1 Thale cress mitochondrion 99.11 80.04
AT5G08680.1 Thale cress mitochondrion 99.11 79.61
GSMUA_Achr2P07900_001 Banana mitochondrion 31.18 78.65
GSMUA_Achr2P07890_001 Banana cytosol 12.69 78.08
Bra028649.1-P Field mustard mitochondrion 96.66 76.95
VIT_17s0000g02900.t01 Wine grape mitochondrion 91.76 74.37
PGSC0003DMT400078507 Potato cytosol 91.76 74.1
Os05t0553000-02 Rice mitochondrion 91.09 74.09
VIT_01s0011g04490.t01 Wine grape mitochondrion 91.76 73.97
GSMUA_Achr9P21710_001 Banana mitochondrion 91.31 73.87
Solyc05g008460.2.1 Tomato plastid 91.54 73.79
Solyc02g091130.2.1 Tomato unclear 90.42 73.68
PGSC0003DMT400078610 Potato mitochondrion 90.42 73.68
KXG22502 Sorghum mitochondrion 90.65 73.6
KRH48739 Soybean cytosol, mitochondrion 43.43 73.58
KXG33146 Sorghum mitochondrion 90.65 73.47
Zm00001d038929_P001 Maize mitochondrion 90.42 73.42
Zm00001d009488_P001 Maize plasma membrane 90.42 73.42
TraesCS3A01G264700.1 Wheat mitochondrion 89.98 73.32
TraesCS3B01G298000.1 Wheat mitochondrion 89.98 73.32
HORVU3Hr1G063590.2 Barley plasma membrane 89.75 73.14
Solyc04g007550.2.1 Tomato plastid 91.54 73.13
PGSC0003DMT400015365 Potato mitochondrion 91.31 72.95
GSMUA_Achr3P20950_001 Banana mitochondrion 90.2 72.84
TraesCS3D01G264800.2 Wheat golgi 89.53 72.83
KRG90945 Soybean mitochondrion 90.65 72.81
HORVU1Hr1G083840.2 Barley mitochondrion 89.75 72.74
KRH35827 Soybean nucleus 90.2 72.45
GSMUA_Achr3P29100_001 Banana mitochondrion 91.31 72.31
TraesCS4A01G151900.1 Wheat cytosol, mitochondrion, plastid 20.94 72.31
TraesCS1A01G379000.1 Wheat mitochondrion 88.64 71.97
Zm00001d043834_P001 Maize mitochondrion 90.2 71.18
GSMUA_AchrUn_... Banana mitochondrion 78.62 64.07
CDY17918 Canola cytosol 38.31 54.09
GSMUA_Achr1P20890_001 Banana plastid 56.12 52.5
CDX98579 Canola plastid 69.04 51.58
CDX99946 Canola plastid 69.04 51.58
CDY38701 Canola plastid 69.04 51.58
KRH18721 Soybean cytosol 24.94 50.68
CDY21198 Canola cytosol 22.49 43.72
CDY17919 Canola cytosol 9.13 27.89
CDY01384 Canola cytosol 20.94 21.66
CDX73218 Canola cytosol 21.38 19.88
CDY51327 Canola cytosol 21.38 19.75
CDY54328 Canola cytosol 21.38 19.75
CDX87646 Canola cytosol 21.38 19.67
CDY31899 Canola cytosol 21.16 19.55
CDX96645 Canola cytosol 21.16 19.55
CDY29363 Canola cytosol 21.16 19.55
CDY67023 Canola cytosol 21.6 19.13
CDX88489 Canola cytosol 25.61 18.46
CDY57944 Canola cytosol 25.61 18.46
CDX87424 Canola cytosol 25.61 18.46
CDX79274 Canola cytosol 25.61 18.46
CDX77882 Canola mitochondrion 5.79 12.04
CDX99333 Canola mitochondrion 5.79 11.45
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14Gene3D:1.10.1140.10MapMan:2.4.6.2.2Gene3D:2.40.10.170Gene3D:3.40.50.300
GO:A0A078I5P1UniProt:A0A078I5P1InterPro:AAA+_ATPaseInterPro:ATP_synth_F1_bsuInterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_N_sf
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_F1/V1_b/a_CInterPro:ATPase_a/bsu_ASProteinID:CDY21559.1EnsemblPlants:CDY44784ProteinID:CDY44784
ProteinID:CDY44784.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006139GO:GO:0006754
GO:GO:0006810GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0015986
GO:GO:0015992GO:GO:0016020GO:GO:0016787GO:GO:0045261GO:GO:0046034GO:GO:0046933
GO:GO:0099132GO:GO:1902600EnsemblPlantsGene:GSBRNA2T00080785001InterPro:IPR024034HAMAP:MF_01347InterPro:P-loop_NTPase
PFAM:PF00006PFAM:PF02874PIRSF:PIRSF039072ScanProsite:PS00152PANTHER:PTHR15184PANTHER:PTHR15184:SF44
MetaCyc:PWY-7219SMART:SM00382SUPFAM:SSF47917SUPFAM:SSF50615SUPFAM:SSF52540TIGRFAMs:TIGR01039
UniParc:UPI0004EEFFF0SEG:seg::::
Description
BnaC02g01030DATP synthase subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A078I5P1]
Coordinates
chrLK032601:+:90577..92973
Molecular Weight (calculated)
48617.4 Da
IEP (calculated)
5.335
GRAVY (calculated)
-0.108
Length
449 amino acids
Sequence
(BLAST)
001: MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RRVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA LVDLATGQEI
101: LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG QMNEPPGARA
201: RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP APATTFAHLD
301: ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV AEIFTGAPGK
401: YVDLKENINS FQGLLDGKYD DLPEQSFYMV GGIDEVVAKA EKISKEAAA
Best Arabidopsis Sequence Match ( AT5G08670.1 )
(BLAST)
001: MASRRVLSSL LRSSSGRSAA KLGNRNPRLP SPSPARPAAP CSYLLGRVAE YATSSPASSA APSSAPAKDE GKKTYDYGGK GAIGRVCQVI GAIVDVRFED
101: QEGLPPIMTS LEVQDHPTRL VLEVSHHLGQ NVVRTIAMDG TEGLVRGRKV LNTGAPITVP VGRATLGRIM NVLGEPIDER GEIKTEHYLP IHRDAPALVD
201: LATGQEILAT GIKVVDLLAP YQRGGKIGLF GGAGVGKTVL IMELINNVAK AHGGFSVFAG VGERTREGND LYREMIESGV IKLGEKQSES KCALVYGQMN
301: EPPGARARVG LTGLTVAEYF RDAEGQDVLL FIDNIFRFTQ ANSEVSALLG RIPSAVGYQP TLASDLGALQ ERITTTKKGS ITSVQAIYVP ADDLTDPAPA
401: TTFAHLDATT VLSRQISELG IYPAVDPLDS TSRMLSPHIL GEEHYNTARG VQKVLQNYKN LQDIIAILGM DELSEDDKLT VARARKIQRF LSQPFHVAEI
501: FTGAPGKYVD LKENINSFQG LLDGKYDDLS EQSFYMVGGI DEVVAKAEKI AKESAA
Arabidopsis Description
ATP synthase alpha/beta family protein [Source:TAIR;Acc:AT5G08670]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.