Factsheet for HORVU3Hr1G063590.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G083840.2	Barley	mitochondrion	95.46	94.95
KXG33146	Sorghum	mitochondrion	94.19	93.68
TraesCS1A01G379000.1	Wheat	mitochondrion	94.01	93.67
Zm00001d038929_P001	Maize	mitochondrion	93.83	93.49
KXG22502	Sorghum	mitochondrion	92.56	92.22
Os05t0553000-02	Rice	mitochondrion	92.01	91.85
Zm00001d043834_P001	Maize	mitochondrion	94.19	91.21
TraesCS1B01G400300.1	Wheat	cytosol	73.32	90.38
CDX69928	Canola	cytosol	73.14	89.75
CDY44784	Canola	cytosol	73.14	89.75
CDY21559	Canola	cytosol	73.14	89.75
VIT_01s0011g04490.t01	Wine grape	mitochondrion	90.56	89.59
VIT_17s0000g02900.t01	Wine grape	mitochondrion	90.02	89.53
GSMUA_Achr3P20950_001	Banana	mitochondrion	90.02	89.21
Solyc05g008460.2.1	Tomato	plastid	88.75	87.79
PGSC0003DMT400078507	Potato	cytosol	88.57	87.77
Solyc02g091130.2.1	Tomato	unclear	87.66	87.66
PGSC0003DMT400078610	Potato	mitochondrion	87.66	87.66
Solyc04g007550.2.1	Tomato	plastid	88.02	86.3
PGSC0003DMT400015365	Potato	mitochondrion	88.02	86.3
KRH35827	Soybean	nucleus	86.75	85.51
KRG90945	Soybean	mitochondrion	86.75	85.51
AT5G08670.1	Thale cress	mitochondrion	82.58	81.83
AT5G08690.1	Thale cress	mitochondrion	82.58	81.83
Bra009363.1-P	Field mustard	mitochondrion	82.4	81.8
CDX69929	Canola	mitochondrion	82.21	81.77
AT5G08680.1	Thale cress	mitochondrion	82.94	81.75
CDY44783	Canola	mitochondrion	81.85	81.56
CDY21558	Canola	mitochondrion	81.85	81.56
CDX81119	Canola	mitochondrion	82.21	81.47
CDX78350	Canola	mitochondrion	81.85	81.41
CDX78351	Canola	mitochondrion	82.03	81.3
CDX81118	Canola	mitochondrion	81.85	81.26
Bra006013.1-P	Field mustard	mitochondrion	81.49	81.05
Bra009360.1-P	Field mustard	mitochondrion	81.31	81.01
CDY40737	Canola	mitochondrion	81.49	80.9
CDY40736	Canola	cytosol	81.49	80.9
Bra028648.1-P	Field mustard	mitochondrion	81.13	80.54
GSMUA_Achr2P07890_001	Banana	cytosol	10.34	78.08
Bra028649.1-P	Field mustard	mitochondrion	79.31	77.48
HORVU0Hr1G030780.2	Barley	mitochondrion	19.78	73.15
HORVU0Hr1G033050.1	Barley	cytosol	28.86	71.95
AGP50762	Barley	plastid	58.98	65.26
HORVU6Hr1G049250.6	Barley	cytosol	58.98	65.26
HORVU0Hr1G031360.2	Barley	cytosol	37.57	64.49
Bra006014.1-P	Field mustard	mitochondrion	81.85	61.11
HORVU5Hr1G064690.5	Barley	cytosol	24.32	56.07
HORVU4Hr1G016830.2	Barley	cytosol, mitochondrion, nucleus	9.98	54.46
HORVU0Hr1G026070.2	Barley	mitochondrion	24.32	54.25
HORVU3Hr1G053770.2	Barley	cytosol	19.78	52.66
HORVU0Hr1G029780.1	Barley	cytosol	16.52	51.41
HORVU0Hr1G033790.1	Barley	cytosol	9.8	41.86
HORVU5Hr1G064710.3	Barley	cytosol	10.16	35.67
HORVU2Hr1G028800.2	Barley	cytosol	4.17	31.94
HORVU3Hr1G067040.5	Barley	cytosol, plastid	18.51	19.25
HORVU3Hr1G067000.1	Barley	cytosol	8.89	18.99
HORVU7Hr1G087190.1	Barley	plastid	18.15	18.98
HORVU6Hr1G039890.3	Barley	mitochondrion	18.33	18.57
HORVU6Hr1G069640.1	Barley	cytosol, mitochondrion	1.81	16.95
HORVU7Hr1G109770.1	Barley	cytosol, mitochondrion	21.6	14.78

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	MapMan:2.4.6.2.2	Gene3D:2.40.10.170	Gene3D:3.40.50.300
InterPro:AAA+_ATPase	EMBL:AK364060	EMBL:AK366123	InterPro:ATP_synth_F1_beta_su	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	UniProt:F2DJJ2	GO:GO:0000166
GO:GO:0000275	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0006754	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015986	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0045261
GO:GO:0046034	GO:GO:0046933	GO:GO:0099132	GO:GO:1902600	EnsemblPlantsGene:HORVU3Hr1G063590	EnsemblPlants:HORVU3Hr1G063590.2
InterPro:IPR024034	HAMAP:MF_01347	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PFAM:PF11421
PIRSF:PIRSF039072	ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF44	SMART:SM00382	SUPFAM:SSF47917
SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01039	UniParc:UPI00020065D3	SEG:seg	:

Description

ATP synthase subunit beta [Source:UniProtKB/TrEMBL;Acc:F2DJJ2]

Coordinates

chrchr3H:+:485712463..485716048

Molecular Weight (calculated)

58919.6 Da

IEP (calculated)

6.157

GRAVY (calculated)

-0.071

Length

551 amino acids

Sequence
(BLAST)

001: MATRRAISSV LRAASRIRAA SPSPCPRAPL HRPSPAGFLL NRAAAYASSA AAEAAPVTPP PTSDKHTGSK ITDEFTGAGS VGQVCQVIGA VVDVRFDDGL
101: PPILTALEVL DNSIRLVLEV AQHLGENVVR TIAMDGTEGL VRGQKVLNTG SPITVPVGRA TLGRIINVIG EPIDHKGDIK TNSYLPIHRE APAFVEQATE
201: QQILVTGIKV VDLLAPYQRG GKIGLFGGAG VGKTVLIMEL INNVAKAHGG FSVFAGVGER TREGNDLYRE MIESGVIKLD DKQSESKCAL VYGQMNEPPG
301: ARARVGLTGL TVAEHFRDAE GQDVLLFIDN IFRFTQANSE VSALLGRIPS AVGYQPTLAT DLGGLQERIT TTKKGSITSV QAIYVPADDL TDPAPATTFA
401: HLDATTVLSR QISELGIYPA VDPLDSTSRM LSPHVLGQEH YNTARGVQKV LQNYKNLQDI IAILGMDELS EDDKLTVARA RKIQRFLSQP FHVAEVFTGA
501: PGKYVELKEG VQSFQGVLDG KYDDLSEQAF YMVGGIEEVI AKAEKIAKEN A

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.