Factsheet for HORVU2Hr1G028800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G033790.1	Barley	cytosol	98.61	55.04
HORVU5Hr1G064710.3	Barley	cytosol	98.61	45.22
HORVU0Hr1G029780.1	Barley	cytosol	98.61	40.11
HORVU3Hr1G053770.2	Barley	cytosol	98.61	34.3
HORVU0Hr1G031360.2	Barley	cytosol	98.61	22.12
AGP50762	Barley	plastid	98.61	14.26
HORVU6Hr1G049250.6	Barley	cytosol	98.61	14.26
HORVU3Hr1G067000.1	Barley	cytosol	15.28	4.26
HORVU3Hr1G063590.2	Barley	plasma membrane	31.94	4.17
HORVU1Hr1G083840.2	Barley	mitochondrion	31.94	4.15
HORVU7Hr1G087190.1	Barley	plastid	15.28	2.09
HORVU3Hr1G067040.5	Barley	cytosol, plastid	15.28	2.08
HORVU6Hr1G039890.3	Barley	mitochondrion	15.28	2.02
HORVU7Hr1G109770.1	Barley	cytosol, mitochondrion	12.5	1.12
HORVU5Hr1G064690.5	Barley	cytosol	0.0	0.0
HORVU4Hr1G016830.2	Barley	cytosol, mitochondrion, nucleus	0.0	0.0
HORVU0Hr1G033050.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G069640.1	Barley	cytosol, mitochondrion	0.0	0.0
HORVU0Hr1G030780.2	Barley	mitochondrion	0.0	0.0
HORVU0Hr1G026070.2	Barley	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU2Hr1G028800.2	EnsemblPlantsGene:HORVU2Hr1G028800	Gene3D:2.40.10.170	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0046034	GO:GO:1902600	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf
KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	PANTHER:PTHR15184	PANTHER:PTHR15184:SF43	PFAM:PF02874	SUPFAM:SSF50615
UniParc:UPI000B47F699	UniProt:A0A287HIJ1	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:98540498..98541040

Molecular Weight (calculated)

7973.5 Da

IEP (calculated)

8.495

GRAVY (calculated)

-0.492

Length

72 amino acids

Sequence
(BLAST)

1: MRTNPTTSRP GVSTSEEKST RRIDQIIGPV LDVTFPPGKL PYIYNALVVQ SRDTADKQIN VTCEVQQLLG NN

Best Arabidopsis Sequence Match ( ATCG00480.1 )
(BLAST)

001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK

Arabidopsis Description

ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.