Factsheet for HORVU4Hr1G016830.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, mitochondrion

Predictor Summary:

cytosol 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g039850.1.1	Tomato	cytosol	38.61	28.06
HORVU0Hr1G031360.2	Barley	cytosol	49.51	15.58
HORVU0Hr1G033050.1	Barley	cytosol	31.68	14.48
HORVU6Hr1G049250.6	Barley	cytosol	63.37	12.85
AGP50762	Barley	plastid	63.37	12.85
ATCG00480.1	Thale cress	cytosol	58.42	11.85
HORVU3Hr1G063590.2	Barley	plasma membrane	54.46	9.98
HORVU1Hr1G083840.2	Barley	mitochondrion	54.46	9.93
CDX98579	Canola	plastid	58.42	9.82
CDX99946	Canola	plastid	58.42	9.82
CDY38701	Canola	plastid	58.42	9.82
HORVU0Hr1G030780.2	Barley	mitochondrion	11.88	8.05
HORVU5Hr1G064690.5	Barley	cytosol	17.82	7.53
HORVU0Hr1G026070.2	Barley	mitochondrion	14.85	6.07
HORVU3Hr1G053770.2	Barley	cytosol	10.89	5.31
HORVU3Hr1G067000.1	Barley	cytosol	7.92	3.1
HORVU3Hr1G067040.5	Barley	cytosol, plastid	14.85	2.83
HORVU7Hr1G087190.1	Barley	plastid	13.86	2.66
HORVU6Hr1G039890.3	Barley	mitochondrion	13.86	2.57
HORVU7Hr1G109770.1	Barley	cytosol, mitochondrion	16.83	2.11
Zm00001d020223_P001	Maize	cytosol	1.98	1.77
HORVU2Hr1G028800.2	Barley	cytosol	0.0	0.0
HORVU5Hr1G064710.3	Barley	cytosol	0.0	0.0
HORVU0Hr1G033790.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G069640.1	Barley	cytosol, mitochondrion	0.0	0.0
HORVU0Hr1G029780.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU4Hr1G016830.2	EnsemblPlantsGene:HORVU4Hr1G016830	Gene3D:3.40.50.300	InterPro:P-loop_NTPase	PANTHER:PTHR15184	PANTHER:PTHR15184:SF43
SUPFAM:SSF52540	UniParc:UPI000B4688C8	UniProt:A0A287NDL8	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr4H:+:70921572..70922534

Molecular Weight (calculated)

11117.3 Da

IEP (calculated)

9.894

GRAVY (calculated)

-0.488

Length

101 amino acids

Sequence
(BLAST)

001: MELINNIAKA YGGVSVFGGV GERTREGNDL YMEMKESGVI NEKNIEESTA SRQPALRRRL GPVSSDRTSG TPAMNIFSQH PTSSRRRFPC LCGQRSVILT
101: V

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.