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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98579 Canola plastid 97.39 80.7
CDX99946 Canola plastid 97.39 80.7
CDY38701 Canola plastid 97.39 80.7
Solyc04g039850.1.1 Tomato cytosol 22.49 80.58
HORVU4Hr1G016830.2 Barley cytosol, mitochondrion, nucleus 11.85 58.42
AT5G08670.1 Thale cress mitochondrion 64.26 57.55
AT5G08690.1 Thale cress mitochondrion 64.26 57.55
AT5G08680.1 Thale cress mitochondrion 64.26 57.25
Zm00001d020223_P001 Maize cytosol 10.24 45.13
AT1G76030.1 Thale cress cytosol 19.88 20.37
AT1G20260.1 Thale cress cytosol 19.68 20.12
AT4G38510.5 Thale cress cytosol 19.48 19.64
AT1G78900.1 Thale cress cytosol 24.1 19.26
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14MapMan:1.1.9.2.2Gene3D:1.10.1140.10Gene3D:2.40.10.170Gene3D:3.40.50.300
EntrezGene:844757UniProt:A0A1B1W4V2InterPro:AAA+_ATPaseProteinID:ANW47797.1ArrayExpress:ATCG00480EnsemblPlantsGene:ATCG00480
RefSeq:ATCG00480TAIR:ATCG00480RefSeq:ATCG00480-TAIR-GEnsemblPlants:ATCG00480.1TAIR:ATCG00480.1Symbol:ATPB
InterPro:ATP_synth_F1_bsuInterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_N_sfInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_F1/V1_b/a_CInterPro:ATPase_a/bsu_AS
ProteinID:BAA84392.1ProteinID:CAA31380.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005618GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006139GO:GO:0006754GO:GO:0006810GO:GO:0006811GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009058GO:GO:0009409GO:GO:0009507
GO:GO:0009534GO:GO:0009535GO:GO:0009536GO:GO:0009544GO:GO:0009570GO:GO:0009579
GO:GO:0009605GO:GO:0009607GO:GO:0009628GO:GO:0009817GO:GO:0009987GO:GO:0010287
GO:GO:0010319GO:GO:0015986GO:GO:0015992GO:GO:0016020GO:GO:0016787GO:GO:0030312
GO:GO:0031977GO:GO:0045261GO:GO:0046034GO:GO:0046933GO:GO:0099132GO:GO:1902600
InterPro:IPR024034HAMAP:MF_01347RefSeq:NP_051066.1InterPro:P-loop_NTPaseUniProt:P19366PFAM:PF00006
PFAM:PF02874ScanProsite:PS00152PANTHER:PTHR15184PANTHER:PTHR15184:SF43SMART:SM00382SUPFAM:SSF47917
SUPFAM:SSF50615SUPFAM:SSF52540TIGRFAMs:TIGR01039UniParc:UPI0000126421::
Description
ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
Coordinates
chrPt:-:52660..54156
Molecular Weight (calculated)
53937.1 Da
IEP (calculated)
5.153
GRAVY (calculated)
-0.090
Length
498 amino acids
Sequence
(BLAST)
001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.