Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015797.1-P Field mustard cytosol 98.97 98.57
CDX87646 Canola cytosol 98.97 98.57
CDX73218 Canola cytosol 97.74 98.34
AT1G20260.1 Thale cress cytosol 98.15 97.95
TraesCS6D01G173400.1 Wheat cytosol, nucleus, plastid, unclear 95.06 94.67
TraesCS6A01G186300.1 Wheat cytosol 95.06 94.67
TraesCS6B01G218100.1 Wheat cytosol 95.06 94.67
Os06t0568200-01 Rice nucleus, plasma membrane, vacuole 94.86 94.47
Zm00001d036961_P004 Maize plasma membrane, plastid 94.65 94.46
KXG20226 Sorghum cytosol 94.65 94.46
TraesCS7D01G361000.1 Wheat cytosol 94.65 94.26
TraesCS7B01G265500.1 Wheat golgi, nucleus, plastid 94.65 94.26
TraesCS7A01G362000.1 Wheat cytosol 94.65 94.26
AT4G38510.5 Thale cress cytosol 95.68 94.13
Zm00001d046336_P001 Maize cytosol 94.44 92.17
HORVU7Hr1G087190.1 Barley plastid 94.86 87.48
HORVU6Hr1G039890.3 Barley mitochondrion 95.27 85.11
AT1G78900.1 Thale cress cytosol 25.51 19.9
ATCG00480.1 Thale cress cytosol 20.37 19.88
AT5G08690.1 Thale cress mitochondrion 20.99 18.35
AT5G08670.1 Thale cress mitochondrion 20.99 18.35
AT5G08680.1 Thale cress mitochondrion 20.99 18.25
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14MapMan:24.1.1.2.2Gene3D:3.40.50.12240EntrezGene:843934UniProt:A0A178WGH9
ProteinID:AAF26763.1ProteinID:AEE35786.1ArrayExpress:AT1G76030EnsemblPlantsGene:AT1G76030RefSeq:AT1G76030TAIR:AT1G76030
RefSeq:AT1G76030-TAIR-GEnsemblPlants:AT1G76030.1TAIR:AT1G76030.1InterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_V1-cplx_bsu
InterPro:ATPase_a/bsu_ASEMBL:AY094424EMBL:AY125532Unigene:At.21359GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005773GO:GO:0005774GO:GO:0005794
GO:GO:0005886GO:GO:0006139GO:GO:0006357GO:GO:0006810GO:GO:0006811GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009506GO:GO:0009507
GO:GO:0009536GO:GO:0009987GO:GO:0010255GO:GO:0015991GO:GO:0015992GO:GO:0016020
GO:GO:0016043GO:GO:0016787GO:GO:0019725GO:GO:0030835GO:GO:0032991GO:GO:0033180
GO:GO:0043234GO:GO:0046034GO:GO:0046686GO:GO:0051015GO:GO:0051017GO:GO:0051693
GO:GO:1902600EMBL:J04185HAMAP:MF_00310RefSeq:NP_177729.1ProteinID:OAP17457.1InterPro:P-loop_NTPase
UniProt:P11574PFAM:PF00006PFAM:PF02874PIRSF:PIRSF039114PO:PO:0000005PO:PO:0000293
PO:PO:0001016PO:PO:0001017PO:PO:0007131PO:PO:0009025PO:PO:0020030PO:PO:0025195
PO:PO:0025281ScanProsite:PS00152PANTHER:PTHR43389PANTHER:PTHR43389:SF6SUPFAM:SSF52540TIGRFAMs:TIGR01040
UniParc:UPI0000138150InterPro:V-ATPase_su_B/betaEMBL:Z29126:::
Description
VHA-B1V-type proton ATPase subunit B1 [Source:UniProtKB/Swiss-Prot;Acc:P11574]
Coordinates
chr1:+:28533710..28537194
Molecular Weight (calculated)
54110.8 Da
IEP (calculated)
4.729
GRAVY (calculated)
-0.240
Length
486 amino acids
Sequence
(BLAST)
001: MGTNDLDIEE GTLEIGMEYR TVSGVAGPLV ILDKVKGPKY QEIVNIRLGD GSTRRGQVLE VDGEKAVVQV FEGTSGIDNK FTTVQFTGEV LKTPVSLDML
101: GRIFNGSGKP IDNGPPILPE AYLDISGSSI NPSERTYPEE MIQTGISTID VMNSIARGQK IPLFSAAGLP HNEIAAQICR QAGLVKRLEK TVDLLEDHGE
201: DNFAIVFAAM GVNMETAQFF KRDFEENGSM ERVTLFLNLA NDPTIERIIT PRIALTTAEY LAYECGKHVL VILTDMSSYA DALREVSAAR EEVPGRRGYP
301: GYMYTDLATI YERAGRIEGR KGSITQIPIL TMPNDDITHP TPDLTGYITE GQIYIDRQLH NRQIYPPINV LPSLSRLMKS AIGEGMTRKD HSDVSNQLYA
401: NYAIGKDVQA MKAVVGEEAL SSEDLLYLEF LDKFERKFVM QGAYDTRNIF QSLDLAWTLL RIFPRELLHR IPAKTLDQFY SRDSTS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.