Factsheet for HORVU6Hr1G039890.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G090260.14

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G76030.1	HORVU7Hr1G090260.14	AT5G35410.1	17875927

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G186300.1	Wheat	cytosol	89.34	99.59
TraesCS6B01G218100.1	Wheat	cytosol	89.34	99.59
TraesCS6D01G173400.1	Wheat	cytosol, nucleus, plastid, unclear	89.34	99.59
Solyc01g111760.2.1	Tomato	plastid	85.66	97.29
CDY01384	Canola	cytosol	77.02	96.54
PGSC0003DMT400068704	Potato	cytosol	84.93	96.45
Solyc10g055670.1.1	Tomato	cytosol, nucleus, unclear	84.93	96.45
Bra025804.1-P	Field mustard	cytosol	71.51	96.29
CDX73218	Canola	cytosol	85.11	95.86
AT1G20260.1	Thale cress	cytosol	85.29	95.28
AT1G76030.1	Thale cress	cytosol	85.11	95.27
VIT_03s0038g02760.t01	Wine grape	cytosol	85.29	95.08
CDX87646	Canola	cytosol	85.29	95.08
Bra015797.1-P	Field mustard	cytosol	85.29	95.08
CDY54328	Canola	cytosol	84.93	95.06
CDY31899	Canola	cytosol	84.74	94.86
CDY51327	Canola	cytosol	84.74	94.86
CDX96645	Canola	cytosol	84.56	94.65
CDY29363	Canola	cytosol	84.19	94.24
Bra012223.1-P	Field mustard	endoplasmic reticulum	80.7	93.21
VIT_18s0001g01020.t01	Wine grape	cytosol, extracellular	85.48	92.45
HORVU7Hr1G087190.1	Barley	plastid	88.97	91.84
HORVU3Hr1G067000.1	Barley	cytosol	43.01	90.7
HORVU3Hr1G067040.5	Barley	cytosol, plastid	87.13	89.43
PGSC0003DMT400008800	Potato	cytosol	86.03	89.31
HORVU0Hr1G030780.2	Barley	mitochondrion	6.8	24.83
HORVU0Hr1G033050.1	Barley	cytosol	9.38	23.08
HORVU6Hr1G069640.1	Barley	cytosol, mitochondrion	2.39	22.03
HORVU0Hr1G031360.2	Barley	cytosol	12.5	21.18
AGP50762	Barley	plastid	18.75	20.48
HORVU6Hr1G049250.6	Barley	cytosol	18.75	20.48
HORVU0Hr1G029780.1	Barley	cytosol	6.43	19.77
HORVU5Hr1G064690.5	Barley	cytosol	8.64	19.67
HORVU0Hr1G033790.1	Barley	cytosol	4.6	19.38
HORVU3Hr1G053770.2	Barley	cytosol	6.99	18.36
HORVU3Hr1G063590.2	Barley	plasma membrane	18.57	18.33
HORVU1Hr1G083840.2	Barley	mitochondrion	18.2	17.87
HORVU5Hr1G064710.3	Barley	cytosol	4.96	17.2
HORVU0Hr1G026070.2	Barley	mitochondrion	7.54	16.6
HORVU2Hr1G028800.2	Barley	cytosol	2.02	15.28
HORVU7Hr1G109770.1	Barley	cytosol, mitochondrion	22.43	15.16
HORVU4Hr1G016830.2	Barley	cytosol, mitochondrion, nucleus	2.57	13.86

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	MapMan:24.1.1.2.2	Gene3D:3.40.50.12240	UniProt:A0A287U044	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_V1-cplx_bsu	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787
GO:GO:0033180	GO:GO:0046034	GO:GO:1902600	EnsemblPlantsGene:HORVU6Hr1G039890	EnsemblPlants:HORVU6Hr1G039890.3	HAMAP:MF_00310
InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PIRSF:PIRSF039114	ScanProsite:PS00152	PANTHER:PTHR43389
PANTHER:PTHR43389:SF6	SUPFAM:SSF52540	TIGRFAMs:TIGR01040	UniParc:UPI000B478DDA	InterPro:V-ATPase_su_B/beta	:

Description

No Description!

Coordinates

chrchr6H:+:210031729..210037717

Molecular Weight (calculated)

60530.3 Da

IEP (calculated)

4.972

GRAVY (calculated)

-0.256

Length

544 amino acids

Sequence
(BLAST)

001: PNPRYVSSRL TPLESQPTSA QSTENWVDPC AVFVPVLGSW TRIRPRAQIC WLFVASMDLA KDGAEMEEGT LEIGMEYRTV SGVAGPLVIL DKVKGPKYQE
101: IVNIRLGDGT TRRGQVLEVD GEKAVVQVFE GTSGIDNKYT TVQFTGEVLK TPVSLDMLGR IFNGSGKPID NGPPILPEAY LDISGSSINP SERTYPEEMI
201: QTGISTIDVM NSIARGQKIP LFSAAGLPHN EIAAQICRQA GLVKRLEQSK HAAEGGEEDN FAIVFAAMGV NMETAQFFKR DFEENGSMER VTLFLNLAND
301: PTIERIITPR IALTTAEYLA YECGKHVLVI LTDMSSYADA LREVSAAREE VPGRRGYPGY MYTDLATIYE RAGRIEGRKG SITQIPILTM PNDDITHPTP
401: DLTGYITEGQ IYIDRQLHNR QIYPPINVLP SLSRLMKSAI GEGMTRRDHS DVSNQLYANY AIGKDVQAMK AVVGEEALSS EDLLYLEFLD KFERKFVAQG
501: AYDTRNIFQS LDLAWTLLRI FPRELLHRIP AKTLDQFYSR DATH

Best Arabidopsis Sequence Match ( AT4G38510.5 )
(BLAST)

001: MERIKSKMGA AENNLEMEGT LEIGMEYRTV SGVAGPLVIL EKVKGPKYQE IVNIRLGDGT TRRGQVLEVD GEKAVVQVFE GTSGIDNKYT TVQFTGEVLK
101: TPVSLDMLGR IFNGSGKPID NGPPILPEAY LDISGSSINP SERTYPEEMI QTGISTIDVM NSIARGQKIP LFSAAGLPHN EIAAQICRQA GLVKRLEKSD
201: NLLEHQEDDN FAIVFAAMGV NMETAQFFKR DFEENGSMER VTLFLNLAND PTIERIITPR IALTTAEYLA YECGKHVLVI LTDMSSYADA LREVSAAREE
301: VPGRRGYPGY MYTDLATIYE RAGRIEGRKG SITQIPILTM PNDDITHPTP DLTGYITEGQ IYIDRQLHNR QIYPPINVLP SLSRLMKSAI GEGMTRRDHS
401: DVSNQLYANY AIGKDVQAMK AVVGEEALSS EDLLYLEFLD KFERKFVAQG AYDTRNIFQS LDLAWTLLRI FPRELLHRIP AKTLDQFYSR DTTN

Arabidopsis Description

ATPase, V1 complex, subunit B protein [Source:UniProtKB/TrEMBL;Acc:F4JTQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.