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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • cytoskeleton 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51327 Canola cytosol 99.59 99.59
CDY01384 Canola cytosol 88.89 99.54
CDX96645 Canola cytosol 99.38 99.38
CDY31899 Canola cytosol 99.18 99.18
CDY29363 Canola cytosol 98.97 98.97
AT1G20260.1 Thale cress cytosol 97.74 97.54
CDX87646 Canola cytosol 96.91 96.52
CDX73218 Canola cytosol 95.88 96.48
PGSC0003DMT400068704 Potato cytosol 94.65 96.03
Solyc10g055670.1.1 Tomato cytosol, nucleus, unclear 94.65 96.03
Solyc01g111760.2.1 Tomato plastid 94.24 95.62
TraesCS6A01G186300.1 Wheat cytosol 94.86 94.47
TraesCS6D01G173400.1 Wheat cytosol, nucleus, plastid, unclear 94.86 94.47
TraesCS6B01G218100.1 Wheat cytosol 94.86 94.47
KXG20226 Sorghum cytosol 94.65 94.46
Zm00001d036961_P004 Maize plasma membrane, plastid 94.65 94.46
TraesCS7A01G362000.1 Wheat cytosol 94.65 94.26
TraesCS7B01G265500.1 Wheat golgi, nucleus, plastid 94.65 94.26
TraesCS7D01G361000.1 Wheat cytosol 94.65 94.26
Os06t0568200-01 Rice nucleus, plasma membrane, vacuole 94.65 94.26
VIT_03s0038g02760.t01 Wine grape cytosol 94.44 94.06
Zm00001d046336_P001 Maize cytosol 94.86 92.57
VIT_18s0001g01020.t01 Wine grape cytosol, extracellular 95.06 91.85
HORVU7Hr1G087190.1 Barley plastid 94.86 87.48
PGSC0003DMT400008800 Potato cytosol 94.03 87.21
HORVU6Hr1G039890.3 Barley mitochondrion 95.06 84.93
CDX99333 Canola mitochondrion 18.31 39.21
CDX69928 Canola cytosol 19.75 21.38
CDY44784 Canola cytosol 19.75 21.38
CDY21559 Canola cytosol 19.75 21.38
CDY67023 Canola cytosol 21.81 20.91
CDX87424 Canola cytosol 25.51 19.9
CDX88489 Canola cytosol 25.51 19.9
CDY57944 Canola cytosol 25.31 19.74
CDX79274 Canola cytosol 25.31 19.74
CDY44783 Canola mitochondrion 21.19 18.63
CDY21558 Canola mitochondrion 21.19 18.63
CDX69929 Canola mitochondrion 21.19 18.59
CDX78350 Canola mitochondrion 21.19 18.59
CDY40737 Canola mitochondrion 21.19 18.56
CDX81118 Canola mitochondrion 21.19 18.56
CDY40736 Canola cytosol 21.19 18.56
CDX81119 Canola mitochondrion 21.19 18.53
CDX78351 Canola mitochondrion 21.19 18.53
CDY17918 Canola cytosol 10.91 16.67
CDY17919 Canola cytosol 4.94 16.33
CDY21198 Canola cytosol 7.61 16.02
CDX98579 Canola plastid 19.75 15.97
CDX99946 Canola plastid 19.75 15.97
CDY38701 Canola plastid 19.75 15.97
CDX77882 Canola mitochondrion 3.7 8.33
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14MapMan:24.1.1.2.2Gene3D:3.40.50.12240GO:A0A078IYV7UniProt:A0A078IYV7
InterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_V1-cplx_bsuInterPro:ATPase_a/bsu_ASEnsemblPlants:CDY54328ProteinID:CDY54328
ProteinID:CDY54328.1GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006139GO:GO:0006810GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0015991
GO:GO:0015992GO:GO:0016020GO:GO:0033180GO:GO:0046034GO:GO:1902600EnsemblPlantsGene:GSBRNA2T00013890001
HAMAP:MF_00310InterPro:P-loop_NTPasePFAM:PF00006PFAM:PF02874PIRSF:PIRSF039114ScanProsite:PS00152
PANTHER:PTHR43389PANTHER:PTHR43389:SF6MetaCyc:PWY-7219SUPFAM:SSF52540TIGRFAMs:TIGR01040UniParc:UPI0004EBB949
InterPro:V-ATPase_su_B/beta:::::
Description
BnaCnng26740DBnaCnng26740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYV7]
Coordinates
chrLK033305:-:8775..12132
Molecular Weight (calculated)
54065.8 Da
IEP (calculated)
4.774
GRAVY (calculated)
-0.221
Length
486 amino acids
Sequence
(BLAST)
001: MVAAGIDMDE GALEIGMEYR TVSGVAGPLV ILEKVKGPKY QEIVNIRLGD GSMRRGQVLE VDGEKAVVQV FEGTSGIDNK FTTVQFTGEV LKTPVSQDML
101: GRIFNGSGKP IDNGPPILPE AYLDISGSSI NPSERTYPEE MIQTGISTID VMNSIARGQK IPLFSAAGLP HNEIAAQICR QAGLVKRLEK AENLIEDHGE
201: DNFAIVFAAM GVNMETAQFF KRDFEENGSM ERVTLFLNLA NDPTIERIIT PRIALTTAEY LAYECGKHVL VILTDMSSYA DALREVSAAR EEVPGRRGYP
301: GYMYTDLATI YERAGRIEGR KGSITQIPIL TMPNDDITHP TPDLTGYITE GQIYIDRQLH NRQIYPPINV LPSLSRLMKS AIGEGMTRRD HSDVSNQLYA
401: NYAIGKDVQA MKAVVGEEAL SSEDLLYLEF LDKFERKFVM QGAYDTRNIF QSLDLAWTLL RIFPRELLHR IPAKTLDQFY SRDATS
Best Arabidopsis Sequence Match ( AT1G20260.1 )
(BLAST)
001: MVETSIDMEE GTLEIGMEYR TVSGVAGPLV ILDKVKGPKY QEIVNIRLGD GSTRRGQVLE VDGEKAVVQV FEGTSGIDNK FTTVQFTGEV LKTPVSLDML
101: GRIFNGSGKP IDNGPPILPE AYLDISGSSI NPSERTYPEE MIQTGISTID VMNSIARGQK IPLFSAAGLP HNEIAAQICR QAGLVKRLEK TENLIQEDHG
201: EDNFAIVFAA MGVNMETAQF FKRDFEENGS MERVTLFLNL ANDPTIERII TPRIALTTAE YLAYECGKHV LVILTDMSSY ADALREVSAA REEVPGRRGY
301: PGYMYTDLAT IYERAGRIEG RKGSITQIPI LTMPNDDITH PTPDLTGYIT EGQIYIDRQL HNRQIYPPIN VLPSLSRLMK SAIGEGMTRK DHSDVSNQLY
401: ANYAIGKDVQ AMKAVVGEEA LSSEDLLYLE FLDKFERKFV MQGAYDTRNI FQSLDLAWTL LRIFPRELLH RIPAKTLDQF YSRDSTS
Arabidopsis Description
VHA-B3VAB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WCF6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.