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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69928 Canola cytosol 81.05 100.0
CDY44784 Canola cytosol 81.05 100.0
CDY21559 Canola cytosol 81.05 100.0
CDY21558 Canola mitochondrion 99.1 99.28
CDX78350 Canola mitochondrion 98.01 98.01
CDX81118 Canola mitochondrion 97.83 97.66
CDY44783 Canola mitochondrion 97.47 97.65
CDY40737 Canola mitochondrion 97.11 96.94
CDY40736 Canola cytosol 97.11 96.94
CDX78351 Canola mitochondrion 96.39 96.04
AT5G08670.1 Thale cress mitochondrion 96.21 95.86
CDX81119 Canola mitochondrion 96.21 95.86
AT5G08690.1 Thale cress mitochondrion 96.03 95.68
AT5G08680.1 Thale cress mitochondrion 95.85 94.99
GSMUA_Achr1P12870_001 Banana cytosol 70.58 93.32
VIT_01s0011g04490.t01 Wine grape mitochondrion 84.84 84.38
TraesCS1B01G400300.1 Wheat cytosol 68.05 84.34
VIT_17s0000g02900.t01 Wine grape mitochondrion 84.3 84.3
GSMUA_Achr1P20900_001 Banana mitochondrion, peroxisome, plastid 8.66 84.21
GSMUA_Achr9P21710_001 Banana mitochondrion 84.12 83.96
KRG90945 Soybean mitochondrion 84.48 83.72
KRH35827 Soybean nucleus 84.3 83.54
Zm00001d038929_P001 Maize mitochondrion 83.21 83.36
KXG22502 Sorghum mitochondrion 83.03 83.18
TraesCS3A01G264700.1 Wheat mitochondrion 82.67 83.12
TraesCS3B01G298000.1 Wheat mitochondrion 82.49 82.94
PGSC0003DMT400078507 Potato cytosol 83.21 82.91
KXG33146 Sorghum mitochondrion 82.85 82.85
Zm00001d009488_P001 Maize plasma membrane 82.67 82.82
Solyc05g008460.2.1 Tomato plastid 83.21 82.76
PGSC0003DMT400078610 Potato mitochondrion 82.31 82.76
Os05t0553000-02 Rice mitochondrion 82.31 82.61
TraesCS3D01G264800.2 Wheat golgi 82.31 82.61
Solyc02g091130.2.1 Tomato unclear 82.13 82.58
Solyc04g007550.2.1 Tomato plastid 83.75 82.56
PGSC0003DMT400015365 Potato mitochondrion 83.57 82.38
GSMUA_Achr3P20950_001 Banana mitochondrion 82.67 82.37
GSMUA_Achr3P29100_001 Banana mitochondrion 84.3 82.36
HORVU3Hr1G063590.2 Barley plasma membrane 81.77 82.21
HORVU1Hr1G083840.2 Barley mitochondrion 81.95 81.95
GSMUA_Achr2P07900_001 Banana mitochondrion 26.17 81.46
TraesCS1A01G379000.1 Wheat mitochondrion 81.23 81.37
Zm00001d043834_P001 Maize mitochondrion 82.49 80.32
GSMUA_Achr2P07890_001 Banana cytosol 10.29 78.08
KRH48739 Soybean cytosol, mitochondrion 35.2 73.58
GSMUA_AchrUn_... Banana mitochondrion 72.92 73.32
TraesCS4A01G151900.1 Wheat cytosol, mitochondrion, plastid 16.97 72.31
KRH18721 Soybean cytosol 25.63 64.25
GSMUA_Achr1P20890_001 Banana plastid 54.87 63.33
CDY17918 Canola cytosol 31.05 54.09
CDX98579 Canola plastid 58.3 53.74
CDX99946 Canola plastid 58.3 53.74
CDY38701 Canola plastid 58.3 53.74
CDY21198 Canola cytosol 20.4 48.92
CDY17919 Canola cytosol 9.57 36.05
CDY01384 Canola cytosol 16.97 21.66
CDX73218 Canola cytosol 18.59 21.33
CDY51327 Canola cytosol 18.59 21.19
CDY54328 Canola cytosol 18.59 21.19
CDX87646 Canola cytosol 18.59 21.11
CDX96645 Canola cytosol 18.41 20.99
CDY29363 Canola cytosol 18.41 20.99
CDY31899 Canola cytosol 18.41 20.99
CDY67023 Canola cytosol 18.77 20.51
CDX88489 Canola cytosol 22.02 19.58
CDY57944 Canola cytosol 22.02 19.58
CDX87424 Canola cytosol 22.02 19.58
CDX79274 Canola cytosol 22.02 19.58
CDX99333 Canola mitochondrion 6.32 15.42
CDX77882 Canola mitochondrion 4.69 12.04
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14Gene3D:1.10.1140.10MapMan:2.4.6.2.2Gene3D:2.40.10.170Gene3D:3.40.50.300
GO:A0A078C166InterPro:AAA+_ATPaseInterPro:ATP_synth_F1_beta_suInterPro:ATP_synth_F1_bsuInterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_N_sf
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_F1/V1_b/a_CInterPro:ATPase_a/bsu_ASEnsemblPlants:CDX69929ProteinID:CDX69929ProteinID:CDX69929.1
GO:GO:0000166GO:GO:0000275GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0006139GO:GO:0006754GO:GO:0006810GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0015986GO:GO:0016020GO:GO:0016787GO:GO:0016887GO:GO:0045261
GO:GO:0046034GO:GO:0046933GO:GO:1902600EnsemblPlantsGene:GSBRNA2T00136005001InterPro:IPR024034HAMAP:MF_01347
InterPro:P-loop_NTPasePFAM:PF00006PFAM:PF02874PFAM:PF11421PIRSF:PIRSF039072ScanProsite:PS00152
PANTHER:PTHR15184PANTHER:PTHR15184:SF44MetaCyc:PWY-7219SMART:SM00382SUPFAM:SSF47917SUPFAM:SSF50615
SUPFAM:SSF52540TIGRFAMs:TIGR01039UniParc:UPI0004EF0FC4SEG:seg::
Description
BnaA10g22780D
Coordinates
chrLK031790:+:2380996..2383681
Molecular Weight (calculated)
59583.3 Da
IEP (calculated)
6.371
GRAVY (calculated)
-0.155
Length
554 amino acids
Sequence
(BLAST)
001: MASRRVLSTL LRSSSARSAA RFGSRNSRLS SPSPARCASP FGDLLGRVAE YSTSSPAAPS SPPPAKDEAK KTYDYGGKGA IGKVCQVIGA IVDVRFEDQE
101: GLPPIMTSLE VQDHPTRLVL EVSHHLGQNV VRTIAMDGTE GLVRGRRVLN TGAPITVPVG RATLGRIMNV LGEPIDERGE IKTEHYLPIH RDAPALVDLA
201: TGQEILATGI KVVDLLAPYQ RGGKIGLFGG AGVGKTVLIM ELINNVAKAH GGFSVFAGVG ERTREGNDLY REMIESGVIK LGEKQSESKC ALVYGQMNEP
301: PGARARVGLT GLTVAEYFRD AEGQDVLLFI DNIFRFTQAN SEVSALLGRI PSAVGYQPTL ASDLGALQER ITTTKKGSIT SVQAIYVPAD DLTDPAPATT
401: FAHLDATTVL SRQISELGIY PAVDPLDSTS RMLSPHILGE EHYNTARGVQ KVLQNYKNLQ DIIAILGMDE LSEDDKLTVA RARKIQRFLS QPFHVAEIFT
501: GAPGKYVDLK ENINSFQGLL DGKYDDLPEQ SFYMVGGIDE VVAKAEKISK EAAA
Best Arabidopsis Sequence Match ( ATCG00480.1 )
(BLAST)
001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK
Arabidopsis Description
ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.