CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038929_P001	Maize	mitochondrion	98.55	98.55
Zm00001d009488_P001	Maize	plasma membrane	97.83	97.83
KXG33146	Sorghum	mitochondrion	96.75	96.57
Os05t0553000-02	Rice	mitochondrion	95.3	95.47
Zm00001d043834_P001	Maize	mitochondrion	96.02	93.32
TraesCS3B01G298000.1	Wheat	mitochondrion	92.77	93.1
HORVU3Hr1G063590.2	Barley	plasma membrane	92.22	92.56
VIT_17s0000g02900.t01	Wine grape	mitochondrion	92.59	92.42
TraesCS3D01G264800.2	Wheat	golgi	92.22	92.39
VIT_01s0011g04490.t01	Wine grape	mitochondrion	92.59	91.92
HORVU1Hr1G083840.2	Barley	mitochondrion	92.04	91.88
CDY21559	Canola	cytosol	73.6	90.65
CDX69928	Canola	cytosol	73.6	90.65
CDY44784	Canola	cytosol	73.6	90.65
Solyc05g008460.2.1	Tomato	plastid	90.78	90.13
PGSC0003DMT400078610	Potato	mitochondrion	89.51	89.84
Solyc02g091130.2.1	Tomato	unclear	89.51	89.84
PGSC0003DMT400078507	Potato	cytosol	90.24	89.75
GSMUA_Achr3P20950_001	Banana	mitochondrion	90.24	89.75
TraesCS1B01G400300.1	Wheat	cytosol	71.61	88.59
Solyc04g007550.2.1	Tomato	plastid	89.87	88.43
PGSC0003DMT400015365	Potato	mitochondrion	89.69	88.26
CDY44783	Canola	mitochondrion	83.73	83.73
AT5G08690.1	Thale cress	mitochondrion	84.09	83.63
AT5G08670.1	Thale cress	mitochondrion	84.09	83.63
Bra009363.1-P	Field mustard	mitochondrion	83.73	83.42
CDY21558	Canola	mitochondrion	83.36	83.36
CDY40736	Canola	cytosol	83.54	83.24
CDX78350	Canola	mitochondrion	83.36	83.21
Bra028648.1-P	Field mustard	mitochondrion	83.36	83.06
CDY40737	Canola	mitochondrion	83.36	83.06
CDX81118	Canola	mitochondrion	83.36	83.06
CDX69929	Canola	mitochondrion	83.18	83.03
AT5G08680.1	Thale cress	mitochondrion	83.91	83.01
CDX78351	Canola	mitochondrion	83.36	82.91
Bra006013.1-P	Field mustard	mitochondrion	83.0	82.85
Bra009360.1-P	Field mustard	mitochondrion	82.82	82.82
CDX81119	Canola	mitochondrion	83.18	82.73
Bra028649.1-P	Field mustard	mitochondrion	81.37	79.79
KRH48739	Soybean	cytosol, mitochondrion	36.17	75.47
TraesCS4A01G151900.1	Wheat	cytosol, mitochondrion, plastid	17.0	72.31
KRH18721	Soybean	cytosol	27.31	68.33
Bra006014.1-P	Field mustard	mitochondrion	83.18	62.33
OQU84606	Sorghum	cytosol	24.59	53.75
OQU86829	Sorghum	cytosol	12.66	50.36
EES04615	Sorghum	cytosol	23.15	20.61
OQU84653	Sorghum	cytosol	18.08	20.49
EER90164	Sorghum	cytosol	22.97	20.45
KXG20226	Sorghum	cytosol	17.9	20.33

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	MapMan:2.4.6.2.2	Gene3D:2.40.10.170	Gene3D:3.40.50.300
UniProt:A0A1B6PA06	InterPro:AAA+_ATPase	InterPro:ATP_synth_F1_beta_su	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0000275	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810
GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0009987	GO:GO:0015986	GO:GO:0015992	GO:GO:0016020
GO:GO:0016787	GO:GO:0016887	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933	GO:GO:0099132
GO:GO:1902600	InterPro:IPR024034	EnsemblPlants:KXG22502	ProteinID:KXG22502	ProteinID:KXG22502.1	HAMAP:MF_01347
InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PFAM:PF11421	PIRSF:PIRSF039072	ScanProsite:PS00152
PANTHER:PTHR15184	PANTHER:PTHR15184:SF44	MetaCyc:PWY-7219	SMART:SM00382	EnsemblPlantsGene:SORBI_3009G224400	SUPFAM:SSF47917
SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01039	UniParc:UPI00081ADE59	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:56652597..56656038

Molecular Weight (calculated)

58983.7 Da

IEP (calculated)

6.370

GRAVY (calculated)

-0.070

Length

553 amino acids

Sequence
(BLAST)

001: MASRRVASSL LRSVSRLRAA SPAAPRPRAP PHRPSPAGYL FNRAAAYASS AAAQAAPAAS APATGKTGGG KITDEFTGAG AIGQVCQVIG AVVDVRFDEG
101: LPPILTALEV LDNNIRLVLE VAQHLGENMV RTIAMDGTEG LVRGQRVLNT GSPITVPVGR ATLGRIINVI GEPIDERGDI TTNHFLPIHR EAPAFVEQAT
201: EQQILVTGIK VVDLLAPYQR GGKIGLFGGA GVGKTVLIME LINNVAKAHG GFSVFAGVGE RTREGNDLYR EMIESGVIKL GDKQSESKCA LVYGQMNEPP
301: GARARVGLTG LTVAEHFRDA EGQDVLLFID NIFRFTQANS EVSALLGRIP SAVGYQPTLA TDLGGLQERI TTTKKGSITS VQAIYVPADD LTDPAPATTF
401: AHLDATTVLS RQISELGIYP AVDPLDSTSR MLSPHVLGED HYNTARGVQK VLQNYKNLQD IIAILGMDEL SEDDKLTVAR ARKIQRFLSQ PFHVAEVFTG
501: APGKYVELKE SVKSFQGVLD GKYDDLPEQS FYMVGGIEEV IAKAEKIAKE SAS

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.