CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038929_P001	Maize	mitochondrion	96.57	96.75
KXG22502	Sorghum	mitochondrion	96.57	96.75
Zm00001d043834_P001	Maize	mitochondrion	98.74	96.13
Zm00001d009488_P001	Maize	plasma membrane	95.85	96.02
Os05t0553000-02	Rice	mitochondrion	94.95	95.29
TraesCS3B01G298000.1	Wheat	mitochondrion	94.22	94.74
HORVU3Hr1G063590.2	Barley	plasma membrane	93.68	94.19
TraesCS3D01G264800.2	Wheat	golgi	93.68	94.02
HORVU1Hr1G083840.2	Barley	mitochondrion	92.24	92.24
VIT_17s0000g02900.t01	Wine grape	mitochondrion	92.06	92.06
VIT_01s0011g04490.t01	Wine grape	mitochondrion	92.06	91.56
CDX69928	Canola	cytosol	73.47	90.65
CDY21559	Canola	cytosol	73.47	90.65
CDY44784	Canola	cytosol	73.47	90.65
GSMUA_Achr3P20950_001	Banana	mitochondrion	90.43	90.11
Solyc05g008460.2.1	Tomato	plastid	90.43	89.95
PGSC0003DMT400078507	Potato	cytosol	89.89	89.57
Solyc02g091130.2.1	Tomato	unclear	88.99	89.47
PGSC0003DMT400078610	Potato	mitochondrion	88.99	89.47
TraesCS1B01G400300.1	Wheat	cytosol	71.66	88.81
Solyc04g007550.2.1	Tomato	plastid	89.71	88.43
PGSC0003DMT400015365	Potato	mitochondrion	89.53	88.26
CDY44783	Canola	mitochondrion	82.85	83.0
Bra009363.1-P	Field mustard	mitochondrion	83.03	82.88
CDX69929	Canola	mitochondrion	82.85	82.85
AT5G08680.1	Thale cress	mitochondrion	83.57	82.83
CDX78351	Canola	mitochondrion	83.03	82.73
CDY40736	Canola	cytosol	82.85	82.7
CDY40737	Canola	mitochondrion	82.85	82.7
CDY21558	Canola	mitochondrion	82.49	82.64
CDX81119	Canola	mitochondrion	82.85	82.55
Bra028648.1-P	Field mustard	mitochondrion	82.67	82.52
CDX78350	Canola	mitochondrion	82.49	82.49
AT5G08670.1	Thale cress	mitochondrion	82.67	82.37
AT5G08690.1	Thale cress	mitochondrion	82.67	82.37
CDX81118	Canola	mitochondrion	82.49	82.34
Bra006013.1-P	Field mustard	mitochondrion	82.13	82.13
Bra009360.1-P	Field mustard	mitochondrion	81.95	82.1
Bra028649.1-P	Field mustard	mitochondrion	80.69	79.26
KRH48739	Soybean	cytosol, mitochondrion	36.1	75.47
TraesCS4A01G151900.1	Wheat	cytosol, mitochondrion, plastid	16.97	72.31
KRH18721	Soybean	cytosol	26.9	67.42
Bra006014.1-P	Field mustard	mitochondrion	82.85	62.2
OQU84606	Sorghum	cytosol	24.55	53.75
OQU86829	Sorghum	cytosol	12.45	49.64
OQU84653	Sorghum	cytosol	18.05	20.49
EES04615	Sorghum	cytosol	22.92	20.45
KXG20226	Sorghum	cytosol	17.87	20.33
EER90164	Sorghum	cytosol	22.74	20.29

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	MapMan:2.4.6.2.2	Gene3D:2.40.10.170	Gene3D:3.40.50.300
UniProt:A0A1B6Q5E4	InterPro:AAA+_ATPase	InterPro:ATP_synth_F1_beta_su	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0000275	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0015992
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933
GO:GO:0099132	GO:GO:1902600	InterPro:IPR024034	EnsemblPlants:KXG33146	ProteinID:KXG33146	ProteinID:KXG33146.1
ProteinID:KXG33147.1	HAMAP:MF_01347	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PFAM:PF11421
PIRSF:PIRSF039072	ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF44	MetaCyc:PWY-7219	SMART:SM00382
EnsemblPlantsGene:SORBI_3003G260600	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01039	UniParc:UPI00081ADAE7
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:59847293..59852503

Molecular Weight (calculated)

59228.1 Da

IEP (calculated)

6.451

GRAVY (calculated)

-0.089

Length

554 amino acids

Sequence
(BLAST)

001: MATRRALSSI LRSASRLRSA SPSPCPRAPL HHRPSPAGFI LNRAAAYASS AAAQAAPAPP PPSTGKKTGG GKITDEFTGA GAIGQVCQVI GAVVDVRFDE
101: GLPPILTALE VLDNNIRLVL EVAQHLGENM VRTIAMDGTE GLVRGQRVLN TGSPITVPVG RATLGRIINV IGEPIDERGD ITTNHFLPIH REAPAFVEQA
201: TEQQILVTGI KVVDLLAPYQ RGGKIGLFGG AGVGKTVLIM ELINNVAKAH GGFSVFAGVG ERTREGNDLY REMIESGVIK LGDKQSESKC ALVYGQMNEP
301: PGARARVGLT GLTVAEHFRD AEGQDVLLFI DNIFRFTQAN SEVSALLGRI PSAVGYQPTL ATDLGGLQER ITTTKKGSIT SVQAIYVPAD DLTDPAPATT
401: FAHLDATTVL SRQISELGIY PAVDPLDSTS RMLSPHVLGE DHYNTARGVQ KVLQNYKNLQ DIIAILGMDE LSEDDKLTVA RARKIQRFLS QPFHVAEVFT
501: GAPGKYVELK ESVKSFQGVL DGKYDDLPEQ SFYMVGGIEE VIAKAEKIAK ENAS

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.