Factsheet for TraesCS1B01G400300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44784	Canola	cytosol	84.34	83.96
CDY21559	Canola	cytosol	84.34	83.96
CDX69928	Canola	cytosol	84.34	83.96
GSMUA_Achr2P07890_001	Banana	cytosol	12.53	76.71
TraesCS1A01G379000.1	Wheat	mitochondrion	93.29	75.41
HORVU1Hr1G083840.2	Barley	mitochondrion	91.05	73.47
HORVU3Hr1G063590.2	Barley	plasma membrane	90.38	73.32
TraesCS3B01G298000.1	Wheat	mitochondrion	90.16	73.14
Zm00001d038929_P001	Maize	mitochondrion	89.26	72.15
Os05t0553000-02	Rice	mitochondrion	88.59	71.74
KXG33146	Sorghum	mitochondrion	88.81	71.66
KXG22502	Sorghum	mitochondrion	88.59	71.61
Solyc02g091130.2.1	Tomato	unclear	87.92	71.32
PGSC0003DMT400078610	Potato	mitochondrion	87.92	71.32
VIT_17s0000g02900.t01	Wine grape	mitochondrion	88.14	71.12
Solyc05g008460.2.1	Tomato	plastid	88.59	71.1
PGSC0003DMT400078507	Potato	cytosol	88.37	71.04
GSMUA_Achr3P20950_001	Banana	mitochondrion	88.14	70.86
VIT_01s0011g04490.t01	Wine grape	mitochondrion	87.7	70.38
PGSC0003DMT400015365	Potato	mitochondrion	88.37	70.28
Solyc04g007550.2.1	Tomato	plastid	88.37	70.28
Zm00001d043834_P001	Maize	mitochondrion	89.04	69.95
KRH35827	Soybean	nucleus	86.13	68.87
KRG90945	Soybean	mitochondrion	85.68	68.52
AT5G08670.1	Thale cress	mitochondrion	85.01	68.35
AT5G08690.1	Thale cress	mitochondrion	85.01	68.35
CDY21558	Canola	mitochondrion	84.34	68.17
CDY44783	Canola	mitochondrion	84.34	68.17
CDX78350	Canola	mitochondrion	84.34	68.05
CDX69929	Canola	mitochondrion	84.34	68.05
AT5G08680.1	Thale cress	mitochondrion	85.01	67.98
Bra028648.1-P	Field mustard	mitochondrion	84.34	67.93
Bra009363.1-P	Field mustard	mitochondrion	84.34	67.93
CDX81118	Canola	mitochondrion	84.34	67.93
CDY40736	Canola	cytosol	84.34	67.93
CDY40737	Canola	mitochondrion	84.34	67.93
Bra009360.1-P	Field mustard	mitochondrion	83.89	67.81
CDX78351	Canola	mitochondrion	84.34	67.81
CDX81119	Canola	mitochondrion	84.34	67.81
Bra006013.1-P	Field mustard	mitochondrion	83.89	67.69
Bra028649.1-P	Field mustard	mitochondrion	81.66	64.72
TraesCS3B01G186000.1	Wheat	cytosol	54.36	58.13
Bra006014.1-P	Field mustard	mitochondrion	84.12	50.95
TraesCS6B01G218100.1	Wheat	cytosol	20.13	18.44
TraesCS7B01G265500.1	Wheat	golgi, nucleus, plastid	19.91	18.24
TraesCS3B01G280000.2	Wheat	cytosol	19.69	16.12
TraesCS7B01G392600.1	Wheat	plastid	24.16	15.93

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	MapMan:2.4.6.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0045261	GO:GO:0046933
InterPro:IPR024034	HAMAP:MF_01347	InterPro:P-loop_NTPase	PFAM:PF00006	ScanProsite:PS00152	PANTHER:PTHR15184
PANTHER:PTHR15184:SF44	SMART:SM00382	SUPFAM:SSF47917	SUPFAM:SSF52540	TIGRFAMs:TIGR01039	EnsemblPlantsGene:TraesCS1B01G400300
EnsemblPlants:TraesCS1B01G400300.1	TIGR:cd01133	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:630831709..630834625

Molecular Weight (calculated)

48026.8 Da

IEP (calculated)

5.462

GRAVY (calculated)

-0.022

Length

447 amino acids

Sequence
(BLAST)

001: MDGTEGLVRG QKVLNTGSPI TVIIASPFPL AVSACAFPAV LDLMKCRSGG VPVGRATLGR IINVIGEPID HKGDIKTHDF LPIHREAPAF VEQATEQQIL
101: VTGIKVVDLL APYQRGGKIG LFGGAGVGKT VLIMELINNV AKAHGGFSVF AGVGERTREG NDLYREMIES GVIKLDEKQA ESKCALVYGQ MNEPPGARAR
201: VGLTGLTVAE HFRDAEGQDV LLFIDNIFRF TQANSEVSAL LGRIPSAVGY QPTLATDLGG LQERITTTKK GSITSVQAIY VPADDLTDPA PATTFAHLDA
301: TTVLSRQISE LGIYPAVDPL DSTSRMLSPH VLGVDHYNTA RGVQKVLQNY KNLQDIIAIL GMDELSEDDK MTVARARKIQ KFLSQPFHVA EVFTGAPGKY
401: VDLKEGVQSF QGVLDGKYDD ISEHAFYMVG GIDEVIAKAE KIANENA

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.