Factsheet for TraesCS3B01G280000.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G250900.1	Wheat	cytosol	87.36	97.75
TraesCS3A01G250500.1	Wheat	extracellular	87.18	97.54
Os01t0711000-01	Rice	plastid	85.9	96.11
Solyc01g111760.2.1	Tomato	plastid	83.88	95.62
PGSC0003DMT400068704	Potato	cytosol	83.52	95.2
Solyc10g055670.1.1	Tomato	cytosol, nucleus, unclear	83.33	94.99
KRG90658	Soybean	cytosol	84.8	94.88
KRH36093	Soybean	endoplasmic reticulum	84.62	94.67
KRH00994	Soybean	cytosol	84.62	94.48
TraesCS6B01G218100.1	Wheat	cytosol	84.43	94.47
KRH40221	Soybean	nucleus	84.43	94.27
TraesCS7B01G265500.1	Wheat	golgi, nucleus, plastid	84.25	94.26
VIT_03s0038g02760.t01	Wine grape	cytosol	84.07	94.06
GSMUA_Achr5P22160_001	Banana	cytosol	83.88	93.85
OQU84653	Sorghum	cytosol	83.88	93.85
VIT_18s0001g01020.t01	Wine grape	cytosol, extracellular	84.07	91.25
HORVU3Hr1G067040.5	Barley	cytosol, plastid	87.18	89.81
PGSC0003DMT400008800	Potato	cytosol	84.25	87.79
GSMUA_Achr8P05550_001	Banana	cytosol	84.8	83.88
TraesCS3B01G186000.1	Wheat	cytosol	16.3	21.29
TraesCS1B01G400300.1	Wheat	cytosol	16.12	19.69
TraesCS7B01G392600.1	Wheat	plastid	22.89	18.44
TraesCS3B01G298000.1	Wheat	mitochondrion	17.95	17.79

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	MapMan:24.1.1.2.2	Gene3D:3.40.50.12240	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd
InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0046034	GO:GO:1902600
HAMAP:MF_00310	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PIRSF:PIRSF039114	ScanProsite:PS00152
PANTHER:PTHR43389	PANTHER:PTHR43389:SF6	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS3B01G280000	EnsemblPlants:TraesCS3B01G280000.2	InterPro:V-ATPase_su_B/beta
TIGR:cd01135	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:449808595..449813428

Molecular Weight (calculated)

61175.6 Da

IEP (calculated)

5.555

GRAVY (calculated)

-0.166

Length

546 amino acids

Sequence
(BLAST)

001: MVVANGNVDM EEGTLEIGME YRTVSGVAGP LVILDKVKGP KYQEIVNIRL GDGTTRRGQV LEVDGEKAVV QVFEGTSGID NKYTTVQFTG EVLKTPVSLD
101: MLGRIFNGSG KPIDNGPPIL PEAYLDISGS SINPSERTYP EEMIQTGIST IDVMNSIARG QKIPLFSAAG LPHNEIAAQI CRQAGLVKRK EKTDNILEVL
201: VLCTILVWFT WRSDEVLPTC AKRSWVRRSL SALHCAGVRL ASYNSSPYPH LVWELLALCL SLVWFTWQTM GVNMETAQFF KRDFEENGSM ERVTLFLNLA
301: NDPTIERIIT PRIALTTAEY LAYECGKHVL VILTDMSSYA DALREVSAAR EEVPGRRGYP GYMYTDLATI YERAGRIEGR KGSITQIPIL TMPNDDITHP
401: TPDLTGYITE GQIYIDRQLH NRQIYPPINV LPSLSRLMKS AIGEGMTRRD HSDVSNQLYA NYAIGKDVQA MKAVVGEEAL SSEDLLYLEF LDKFERKFVA
501: QGAYDTRNIF QSLDLAWTLL RIFPRELLHR IPAKTLDQFY SRDASH

Best Arabidopsis Sequence Match ( AT4G38510.1 )
(BLAST)

001: MGAAENNLEM EGTLEIGMEY RTVSGVAGPL VILEKVKGPK YQEIVNIRLG DGTTRRGQVL EVDGEKAVVQ VFEGTSGIDN KYTTVQFTGE VLKTPVSLDM
101: LGRIFNGSGK PIDNGPPILP EAYLDISGSS INPSERTYPE EMIQTGISTI DVMNSIARGQ KIPLFSAAGL PHNEIAAQIC RQAGLVKRLE KSDNLLEHQE
201: DDNFAIVFAA MGVNMETAQF FKRDFEENGS MERVTLFLNL ANDPTIERII TPRIALTTAE YLAYECGKHV LVILTDMSSY ADALREVSAA REEVPGRRGY
301: PGYMYTDLAT IYERAGRIEG RKGSITQIPI LTMPNDDITH PTPDLTGYIT EGQIYIDRQL HNRQIYPPIN VLPSLSRLMK SAIGEGMTRR DHSDVSNQLY
401: ANYAIGKDVQ AMKAVVGEEA LSSEDLLYLE FLDKFERKFV AQGAYDTRNI FQSLDLAWTL LRIFPRELLH RIPAKTLDQF YSRDTTN

Arabidopsis Description

ATPase, V1 complex, subunit B protein [Source:UniProtKB/TrEMBL;Acc:F4JTQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.