Factsheet for TraesCS3B01G186000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G031360.2	Barley	cytosol	73.21	95.33
TraesCS5D01G010300.1	Wheat	cytosol	33.73	94.63
TraesCS3D01G338500.1	Wheat	cytosol	28.95	88.97
TraesCS1D01G171700.1	Wheat	cytosol	47.61	86.15
TraesCS6D01G181900.1	Wheat	cytosol	43.3	85.78
VIT_14s0068g01700.t01	Wine grape	cytosol	25.36	83.46
OQU86829	Sorghum	cytosol	27.51	82.73
CDY21198	Canola	cytosol	40.19	72.73
TraesCS6D01G182000.1	Wheat	cytosol	21.53	61.64
Zm00001d000277_P001	Maize	plastid	77.75	57.62
TraesCS1B01G400300.1	Wheat	cytosol	58.13	54.36
TraesCS3B01G298000.1	Wheat	mitochondrion	65.07	49.36
TraesCS6B01G218100.1	Wheat	cytosol	21.53	18.44
TraesCS7B01G265500.1	Wheat	golgi, nucleus, plastid	21.29	18.24
TraesCS3B01G280000.2	Wheat	cytosol	21.29	16.3
TraesCS7B01G392600.1	Wheat	plastid	24.4	15.04

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:2.40.10.170	Gene3D:3.40.50.300	MapMan:35.1
InterPro:AAA+_ATPase	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C
InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020
GO:GO:0016787	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933	GO:GO:1902600	InterPro:IPR024034
HAMAP:MF_01347	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	ScanProsite:PS00152	PANTHER:PTHR15184
PANTHER:PTHR15184:SF43	SMART:SM00382	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01039
EnsemblPlantsGene:TraesCS3B01G186000	EnsemblPlants:TraesCS3B01G186000.1	TIGR:cd01133	:	:	:

Description

No Description!

Coordinates

chr3B:-:201495782..201497278

Molecular Weight (calculated)

45154.4 Da

IEP (calculated)

5.054

GRAVY (calculated)

-0.090

Length

418 amino acids

Sequence
(BLAST)

001: MRTNPTTSPP GASTIEEKST GRIDQIIGPV LDVTFPPGML PYIYNALEVQ RRDTDNKQIN VTCEVQQLLG NNRVRAVAMS ATDGLMRGME VIDTGAPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDSSAMF PIHRSAPAFI ELDTKLSIFE TGIKVVDLLA PYRHGGKIGL FGGAGVGKTV LIVELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESR VINEKNIEES KVAPVYGQMN EPPGARMRVG LTALTMAEYF RDVNKQDVLL FIDNVFRFVQ AGSEVSALLG RMPSIVGYQP
301: TLSTEMGSLQ ERIASTKKGS ITSIQAVYVP ADDLTNPAPA TTFAHLDATI VLSRGLASKG IYPAVDPLDS TSTMLQPRIV GNEHYETAQR VKETLQRYKE
401: LQDIIAILGL DELSEEGH

Best Arabidopsis Sequence Match ( ATCG00480.1 )
(BLAST)

001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK

Arabidopsis Description

ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.