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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 plastid: 18453340
plastid: 19688749
plastid: 20089766
plastid: 22065420
plastid: 23198870
msms PMID: 19688749 doi
C Zörb, R Herbst, C Forreiter, S Schubert
Institute of Plant Nutrition (IFZ), Justus Liebig University Giessen, Giessen, Germany. czoerb@plantnutrition.uni-kiel.de
msms PMID: 20089766 doi
G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 18453340 doi
W Majeran, B Zybailov, AJ Ytterberg, J Dunsmore, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G010300.1 Wheat cytosol 24.82 93.96
Zm00001d050687_P001 Maize cytosol 38.3 90.76
TraesCS3D01G338500.1 Wheat cytosol 21.45 88.97
VIT_14s0068g01700.t01 Wine grape cytosol 18.79 83.46
TraesCS3B01G186000.1 Wheat cytosol 57.62 77.75
GRMZM5G808402_P01 Maize cytosol, mitochondrion, plastid 67.02 75.9
Zm00001d006403_P001 Maize plastid 67.02 75.9
HORVU0Hr1G031360.2 Barley cytosol 42.2 74.14
TraesCS6D01G182000.1 Wheat cytosol 17.02 65.75
TraesCS6D01G181900.1 Wheat cytosol 22.7 60.66
TraesCS1D01G171700.1 Wheat cytosol 23.58 57.58
OQU86829 Sorghum cytosol 13.3 53.96
Zm00001d009488_P001 Maize plasma membrane 51.42 52.44
Zm00001d038929_P001 Maize mitochondrion 51.42 52.44
Zm00001d043834_P001 Maize mitochondrion 51.42 50.97
CDY21198 Canola cytosol 20.74 50.65
Zm00001d020223_P001 Maize cytosol 8.33 41.59
Zm00001d036961_P004 Maize plasma membrane, plastid 16.13 18.69
Zm00001d015426_P001 Maize cytosol 16.31 18.29
Zm00001d046336_P001 Maize cytosol 16.13 18.27
Zm00001d053765_P003 Maize cytosol 18.97 17.23
Zm00001d015427_P001 Maize extracellular, plastid 1.77 8.33
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14MapMan:1.1.9.2.5Gene3D:1.10.1140.10Gene3D:2.60.15.10Gene3D:3.40.50.12280
Gene3D:3.40.50.300UniProt:A0A1X7YHE3InterPro:AAA+_ATPaseInterPro:ATP_synth_F1_bsuInterPro:ATP_synth_F1_dsu/esuInterPro:ATP_synth_F1_dsu/esu_N
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_F1/V1_b/a_CInterPro:ATPase_a/bsu_ASInterPro:ATPsynth_dsu/esu_NGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006139GO:GO:0006754GO:GO:0006810GO:GO:0006811
GO:GO:0008137GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507GO:GO:0009535
GO:GO:0009536GO:GO:0009579GO:GO:0009987GO:GO:0015986GO:GO:0015992GO:GO:0016020
GO:GO:0016787GO:GO:0045261GO:GO:0046933GO:GO:0048038GO:GO:0051536GO:GO:0051539
GO:GO:0055114GO:GO:0099132InterPro:IPR024034InterPro:IPR036771HAMAP:MF_00530HAMAP:MF_01347
InterPro:NADH_UQ_OxRdtase_20Kd_suInterPro:NADH_UbQ_OxRdtase-like_20kDaInterPro:P-loop_NTPasePFAM:PD000944PFAM:PF00006PFAM:PF01058
PFAM:PF02823ScanProsite:PS00152ScanProsite:PS01150PANTHER:PTHR15184PANTHER:PTHR15184:SF43SMART:SM00382
SUPFAM:SSF47917SUPFAM:SSF51344SUPFAM:SSF52540SUPFAM:SSF56770TIGRFAMs:TIGR01039TIGRFAMs:TIGR01216
UniParc:UPI000844B8C7EnsemblPlantsGene:Zm00001d000277EnsemblPlants:Zm00001d000277_P001EnsemblPlants:Zm00001d000277_T001SEG:seg:
Description
ATP synthase subunit beta chloroplastic
Coordinates
chrB73V4_ctg134:-:46348..52214
Molecular Weight (calculated)
61443.0 Da
IEP (calculated)
4.896
GRAVY (calculated)
-0.078
Length
564 amino acids
Sequence
(BLAST)
001: MSATEGLMRG MEVIDTGTPL SVPVGGATLG RIFNVLGEPI DNLGPVDTSA TFPIHRSAPA FIELDTKLSI FETGIKVVDL LAPYRRGGKI GLFGGAGVGK
101: TVLIMELINN IAKAHGGVSV FGGVGERTRE GNDLYMEMKE SGVINEKNIE ESKVALVYGQ MNEPPGARMR VGLTALTMAE YFRDVNKQDV LLFIDNIFRF
201: VQAGSEVSAL LGRMPSAVGY QPTLSTEMGS LQERITSTKK GSITSIQAVY VPADDLTDPA PATTFAHLDA TTVLSRGLAS KGIYPAVDPL DSTSTMLQPR
301: IVGNEHYETA QRVKETLQRY KELQDIIAIL GLDELSEEDR LTVARARKIE RFLSQPFFVA EVFTGSPGNG QIGVLPNHAP INTAVDMGPL RIRLLNDQWL
401: TAVLWSGFAR IVNNEIIILG NDAELGSDID PEEAQQALEI AEANLSKAEG SRFDFDRYGL VPRSSPRQAD LILTAVRLYE QMPEPKYVIA MGACTITGGM
501: FSTDSYSTVR GVDKLIPVDV YLPGCPPKPE AVIDALTKLQ KYNDSKKFLP RTLYRAYYLE QLGK
Best Arabidopsis Sequence Match ( ATCG00480.1 )
(BLAST)
001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK
Arabidopsis Description
ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.