Factsheet for TraesCS1D01G171700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G033790.1	Barley	cytosol	51.08	91.47
HORVU0Hr1G029780.1	Barley	cytosol	69.7	90.96
TraesCS5D01G010300.1	Wheat	cytosol	57.58	89.26
TraesCS3D01G338500.1	Wheat	cytosol	51.95	88.24
HORVU3Hr1G053770.2	Barley	cytosol	76.62	85.51
TraesCS6D01G181900.1	Wheat	cytosol	76.62	83.89
OQU86829	Sorghum	cytosol	48.48	80.58
HORVU5Hr1G064710.3	Barley	cytosol	49.35	72.61
CDY21198	Canola	cytosol	70.56	70.56
VIT_00s0332g00060.t01	Wine grape	mitochondrion	59.74	60.53
TraesCS3B01G186000.1	Wheat	cytosol	86.15	47.61
TraesCS2D01G284400.1	Wheat	plastid	90.48	41.97
TraesCS2D01G584400.2	Wheat	cytosol	84.85	41.18
TraesCS1D01G181600.1	Wheat	cytosol	50.65	33.43
Zm00001d000277_P001	Maize	plastid	57.58	23.58
TraesCS3D01G264800.2	Wheat	golgi	53.68	22.46
TraesCS3D01G250900.1	Wheat	cytosol	17.32	8.2
TraesCS6D01G173400.1	Wheat	cytosol, nucleus, plastid, unclear	16.88	7.99
TraesCS7D01G361000.1	Wheat	cytosol	16.88	7.99
TraesCS7D01G475900.2	Wheat	cytosol	19.48	7.32
TraesCS1D01G136000.1	Wheat	cytosol, golgi	4.33	2.93
TraesCS6D01G182000.1	Wheat	cytosol	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:2.40.10.170	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0046034
GO:GO:1902600	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PANTHER:PTHR15184	PANTHER:PTHR15184:SF43
SUPFAM:SSF50615	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1D01G171700	EnsemblPlants:TraesCS1D01G171700.1	SEG:seg	:

Description

No Description!

Coordinates

chr1D:-:244951405..244952100

Molecular Weight (calculated)

24811.1 Da

IEP (calculated)

6.791

GRAVY (calculated)

-0.028

Length

231 amino acids

Sequence
(BLAST)

001: MRTNPTTSPP EVSTIEEKST GRIDQIIGPV LDVTFPPGKL PYIYNALVVQ SRDTADNKIN VTCEVQQLLG NNRVSVVAMS ATNGLMRGME VIDMGAPLSV
101: PVSGATLGRI FNVLGEPVHN LGPVDSSATF PIHRSAPAFI ELDTKFSIFE TCIKVIDLSA PYRRGGKIGL FGGPGVGKTV LIMELINNIA KSHGGVSVFG
201: GVGEQTREGN DLYMEMKESG VINEKILRNQ R

Best Arabidopsis Sequence Match ( AT5G08670.1 )
(BLAST)

001: MASRRVLSSL LRSSSGRSAA KLGNRNPRLP SPSPARPAAP CSYLLGRVAE YATSSPASSA APSSAPAKDE GKKTYDYGGK GAIGRVCQVI GAIVDVRFED
101: QEGLPPIMTS LEVQDHPTRL VLEVSHHLGQ NVVRTIAMDG TEGLVRGRKV LNTGAPITVP VGRATLGRIM NVLGEPIDER GEIKTEHYLP IHRDAPALVD
201: LATGQEILAT GIKVVDLLAP YQRGGKIGLF GGAGVGKTVL IMELINNVAK AHGGFSVFAG VGERTREGND LYREMIESGV IKLGEKQSES KCALVYGQMN
301: EPPGARARVG LTGLTVAEYF RDAEGQDVLL FIDNIFRFTQ ANSEVSALLG RIPSAVGYQP TLASDLGALQ ERITTTKKGS ITSVQAIYVP ADDLTDPAPA
401: TTFAHLDATT VLSRQISELG IYPAVDPLDS TSRMLSPHIL GEEHYNTARG VQKVLQNYKN LQDIIAILGM DELSEDDKLT VARARKIQRF LSQPFHVAEI
501: FTGAPGKYVD LKENINSFQG LLDGKYDDLS EQSFYMVGGI DEVVAKAEKI AKESAA

Arabidopsis Description

ATP synthase alpha/beta family protein [Source:TAIR;Acc:AT5G08670]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.