Factsheet for TraesCS6D01G182000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G181600.1	Wheat	cytosol	67.12	28.0
TraesCS1D01G136000.1	Wheat	cytosol, golgi	64.38	27.57
TraesCS3B01G186000.1	Wheat	cytosol	61.64	21.53
TraesCS2D01G284400.1	Wheat	plastid	67.81	19.88
TraesCS2D01G584400.2	Wheat	cytosol	60.27	18.49
Zm00001d000277_P001	Maize	plastid	65.75	17.02
TraesCS3D01G264800.2	Wheat	golgi	57.53	15.22
TraesCS3D01G250900.1	Wheat	cytosol	20.55	6.15
TraesCS6D01G173400.1	Wheat	cytosol, nucleus, plastid, unclear	20.55	6.15
TraesCS7D01G361000.1	Wheat	cytosol	19.86	5.94
TraesCS7D01G475900.2	Wheat	cytosol	19.18	4.55
VIT_00s0332g00060.t01	Wine grape	mitochondrion	4.11	2.63
HORVU3Hr1G053770.2	Barley	cytosol	1.37	0.97
OQU86829	Sorghum	cytosol	0.0	0.0
TraesCS1D01G171700.1	Wheat	cytosol	0.0	0.0
HORVU5Hr1G064710.3	Barley	cytosol	0.0	0.0
HORVU0Hr1G033790.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G029780.1	Barley	cytosol	0.0	0.0
TraesCS3D01G338500.1	Wheat	cytosol	0.0	0.0
TraesCS5D01G010300.1	Wheat	cytosol	0.0	0.0
TraesCS6D01G181900.1	Wheat	cytosol	0.0	0.0
CDY21198	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6D01G182000.1	EnsemblPlantsGene:TraesCS6D01G182000	Gene3D:3.40.50.12240	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:P-loop_NTPase	KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	PANTHER:PTHR15184
PANTHER:PTHR15184:SF43	PFAM:PF00006	SUPFAM:SSF52540	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6D:+:210721793..210722233

Molecular Weight (calculated)

16706.0 Da

IEP (calculated)

9.246

GRAVY (calculated)

-0.290

Length

146 amino acids

Sequence
(BLAST)

001: MNEPPGARMR VGLTALTMVE YFPNVNKQDM LLFIDNIFRF VQAGSEVSAL LGRMPSAVGY QPTLSTEMGS LQERIASTKK GSNFDSSSLC IYRRFDRPCP
101: CHNICTFGCY YRTFQRISFQ GYLSSSRSFR FNLDYATASD RWQRTL

Best Arabidopsis Sequence Match ( ATCG00480.1 )
(BLAST)

001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK

Arabidopsis Description

ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.