CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G029780.1	Barley	cytosol	84.17	66.1
HORVU0Hr1G033790.1	Barley	cytosol	52.52	56.59
HORVU3Hr1G053770.2	Barley	cytosol	84.17	56.52
TraesCS6D01G181900.1	Wheat	cytosol	81.3	53.55
TraesCS1D01G171700.1	Wheat	cytosol	80.58	48.48
TraesCS5D01G010300.1	Wheat	cytosol	51.08	47.65
HORVU5Hr1G064710.3	Barley	cytosol	51.08	45.22
CDY21198	Canola	cytosol	74.82	45.02
VIT_00s0332g00060.t01	Wine grape	mitochondrion	71.22	43.42
TraesCS3D01G338500.1	Wheat	cytosol	39.57	40.44
TraesCS3B01G186000.1	Wheat	cytosol	82.73	27.51
Zm00001d000277_P001	Maize	plastid	53.96	13.3
KXG22502	Sorghum	mitochondrion	50.36	12.66
KXG33146	Sorghum	mitochondrion	49.64	12.45
OQU84653	Sorghum	cytosol	23.02	6.56
KXG20226	Sorghum	cytosol	22.3	6.37
EER90164	Sorghum	cytosol	20.86	4.67
EES04615	Sorghum	cytosol	20.86	4.67
OQU84606	Sorghum	cytosol	0.72	0.4
TraesCS6D01G182000.1	Wheat	cytosol	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:2.40.10.170	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1W0VXG8
InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015992	GO:GO:0046034	GO:GO:1902600	EnsemblPlants:OQU86829	ProteinID:OQU86829
ProteinID:OQU86829.1	InterPro:P-loop_NTPase	PFAM:PF02874	PANTHER:PTHR15184	PANTHER:PTHR15184:SF43	MetaCyc:PWY-7219
EnsemblPlantsGene:SORBI_3003G159101	SUPFAM:SSF50615	SUPFAM:SSF52540	UniParc:UPI0009DC85F7	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:18264025..18264561

Molecular Weight (calculated)

14943.1 Da

IEP (calculated)

9.924

GRAVY (calculated)

-0.063

Length

139 amino acids

Sequence
(BLAST)

001: MRTNPTTSRP GVSTIEEKSV GRIDQIIGPV LDITFPPGKL PYIYNALIVK SQDTADKQIN MTFGGATLGR IFNVLGEPID NLGPVDTSAT FPIHRSAPAF
101: IELDTKLSIF ETGIKVVDLL APYRRGGKIG LFGGGGRSR

Best Arabidopsis Sequence Match ( ATCG00480.1 )
(BLAST)

001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK

Arabidopsis Description

ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.