CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g007320.2.1	Tomato	plastid	78.26	32.51
KXG22502	Sorghum	mitochondrion	53.75	24.59
KXG33146	Sorghum	mitochondrion	53.75	24.55
OQU84653	Sorghum	cytosol	18.58	9.63
KXG20226	Sorghum	cytosol	18.18	9.45
EER90164	Sorghum	cytosol	18.97	7.73
EES04615	Sorghum	cytosol	18.97	7.73
OQU86829	Sorghum	cytosol	0.4	0.72

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1Z5RMJ5
InterPro:ATP_synth_F1_dsu/esu	InterPro:ATP_synth_F1_dsu/esu_N	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	InterPro:ATPsynth_dsu/esu_N
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020
GO:GO:0016787	GO:GO:0045261	GO:GO:0046933	GO:GO:0099132	InterPro:IPR024034	InterPro:IPR036771
EnsemblPlants:OQU84606	ProteinID:OQU84606	ProteinID:OQU84606.1	InterPro:P-loop_NTPase	PFAM:PD000944	PFAM:PF00006
PFAM:PF02823	ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF43	EnsemblPlantsGene:SORBI_3004G087000	SUPFAM:SSF47917
SUPFAM:SSF51344	SUPFAM:SSF52540	UniParc:UPI000B8BA7CF	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:7313253..7314490

Molecular Weight (calculated)

27644.8 Da

IEP (calculated)

4.449

GRAVY (calculated)

-0.275

Length

253 amino acids

Sequence
(BLAST)

001: MSPHQPDREE TEDLMHLTAP VARPDDAQLL HRGAVGYQPT LSTEMGSLQE RITSTKKGSI TSIQAVYVPA DDLTDPAPAT TFAHLDATTV LSRGLASKGI
101: YPAVDPLDST STMLQPRIVG NEHYETAQRV KETLQRYKEL QDIIAILGLD ELSEEVRLTV ARTRKIERFL SQPFFVAEVF TGSPGNGQIG VLPNHAPINT
201: AVDMGPLRIR LLNDQWLTAI IILGNDAELG SDIDPEEAQQ ALEIAEANLS KAE

Best Arabidopsis Sequence Match ( ATCG00480.1 )
(BLAST)

001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK

Arabidopsis Description

ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.