Factsheet for VIT_00s0332g00060.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G033790.1	Barley	cytosol	47.37	83.72
HORVU0Hr1G029780.1	Barley	cytosol	64.04	82.49
HORVU3Hr1G053770.2	Barley	cytosol	64.91	71.5
OQU86829	Sorghum	cytosol	43.42	71.22
VIT_14s0068g01700.t01	Wine grape	cytosol	38.6	69.29
HORVU5Hr1G064710.3	Barley	cytosol	46.93	68.15
TraesCS1D01G171700.1	Wheat	cytosol	60.53	59.74
TraesCS5D01G010300.1	Wheat	cytosol	37.72	57.72
TraesCS6D01G181900.1	Wheat	cytosol	52.63	56.87
TraesCS3D01G338500.1	Wheat	cytosol	31.14	52.21
VIT_01s0011g04490.t01	Wine grape	mitochondrion	38.6	15.8
VIT_17s0000g02900.t01	Wine grape	mitochondrion	38.16	15.7
VIT_03s0038g02760.t01	Wine grape	cytosol	16.67	7.79
VIT_18s0001g01020.t01	Wine grape	cytosol, extracellular	16.23	7.36
VIT_09s0054g00890.t01	Wine grape	extracellular	15.35	5.62
VIT_04s0008g02580.t01	Wine grape	cytosol	14.91	5.39
VIT_06s0009g03730.t01	Wine grape	cytosol	1.75	4.44
TraesCS6D01G182000.1	Wheat	cytosol	2.63	4.11

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:2.40.10.170	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	ProteinID:CCB57591	ProteinID:CCB57591.1	UniProt:F6HSD2	EMBL:FN596244	GO:GO:0006139
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015992	GO:GO:0046034
GO:GO:1902600	InterPro:P-loop_NTPase	PFAM:PF02874	PANTHER:PTHR15184	PANTHER:PTHR15184:SF43	SUPFAM:SSF50615
SUPFAM:SSF52540	UniParc:UPI00021096A3	ArrayExpress:VIT_00s0332g00060	EnsemblPlantsGene:VIT_00s0332g00060	EnsemblPlants:VIT_00s0332g00060.t01	:

Description

No Description!

Coordinates

chrUn:+:23717409..23719687

Molecular Weight (calculated)

24887.8 Da

IEP (calculated)

10.195

GRAVY (calculated)

0.168

Length

228 amino acids

Sequence
(BLAST)

001: MRINPTTSGP RVSTLEKKNL GRIAQIIGPI LDVAFPPGKM PNIYNALVVK GRDTVGQQIN VTCEVQQLLG NNRVRAVAMS ATDGLMRGME VIDTGAPLSV
101: PVGGATLGRI FNVLGELVDN LGPVDTRTTS PIHRSAPAFI QLDTKFSIFE TGIQVVDLLA PYRLGGKIEL LGLAGWKDCF LPSLVLDRSD RVFIIWSKRI
201: RTFACRYQKP MPYHLAILHT ALGLLITN

Best Arabidopsis Sequence Match ( ATCG00480.1 )
(BLAST)

001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK

Arabidopsis Description

ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.