Factsheet for VIT_06s0009g03730.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g02760.t01	Wine grape	cytosol	88.89	16.39
VIT_18s0001g01020.t01	Wine grape	cytosol, extracellular	88.89	15.9
VIT_09s0054g00890.t01	Wine grape	extracellular	36.67	5.3
VIT_04s0008g02580.t01	Wine grape	cytosol	35.56	5.07
VIT_17s0000g02900.t01	Wine grape	mitochondrion	23.33	3.79
VIT_01s0011g04490.t01	Wine grape	mitochondrion	23.33	3.77
VIT_00s0332g00060.t01	Wine grape	mitochondrion	4.44	1.75
VIT_14s0068g01700.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:3.40.50.12240	MapMan:35.1	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	ProteinID:CCB49030
ProteinID:CCB49030.1	UniProt:F6HA10	EMBL:FN595504	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:P-loop_NTPase	PFAM:PF00006	PANTHER:PTHR43389	PANTHER:PTHR43389:SF6	SUPFAM:SSF52540
UniParc:UPI0002109283	InterPro:V-ATPase_su_B/beta	ArrayExpress:VIT_06s0009g03730	EnsemblPlantsGene:VIT_06s0009g03730	EnsemblPlants:VIT_06s0009g03730.t01	RefSeq:XP_003632238
RefSeq:XP_003632238.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6:-:16989946..16990596

Molecular Weight (calculated)

10058.0 Da

IEP (calculated)

4.399

GRAVY (calculated)

0.067

Length

90 amino acids

Sequence
(BLAST)

1: MERVTPFLNL VNDPTIEHII TLRIALTTAE YLAYECGKHV LVILADMSSD ADALYEVSAA REEVPGRRGY PGYMCADLAT IYERAGAWTY

Best Arabidopsis Sequence Match ( AT1G20260.1 )
(BLAST)

001: MVETSIDMEE GTLEIGMEYR TVSGVAGPLV ILDKVKGPKY QEIVNIRLGD GSTRRGQVLE VDGEKAVVQV FEGTSGIDNK FTTVQFTGEV LKTPVSLDML
101: GRIFNGSGKP IDNGPPILPE AYLDISGSSI NPSERTYPEE MIQTGISTID VMNSIARGQK IPLFSAAGLP HNEIAAQICR QAGLVKRLEK TENLIQEDHG
201: EDNFAIVFAA MGVNMETAQF FKRDFEENGS MERVTLFLNL ANDPTIERII TPRIALTTAE YLAYECGKHV LVILTDMSSY ADALREVSAA REEVPGRRGY
301: PGYMYTDLAT IYERAGRIEG RKGSITQIPI LTMPNDDITH PTPDLTGYIT EGQIYIDRQL HNRQIYPPIN VLPSLSRLMK SAIGEGMTRK DHSDVSNQLY
401: ANYAIGKDVQ AMKAVVGEEA LSSEDLLYLE FLDKFERKFV MQGAYDTRNI FQSLDLAWTL LRIFPRELLH RIPAKTLDQF YSRDSTS

Arabidopsis Description

VHA-B3VAB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WCF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.