Factsheet for VIT_01s0011g04490.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g02900.t01	Wine grape	mitochondrion	94.08	94.58
Zm00001d038929_P001	Maize	mitochondrion	91.92	92.59
KXG22502	Sorghum	mitochondrion	91.92	92.59
KXG33146	Sorghum	mitochondrion	91.56	92.06
Zm00001d009488_P001	Maize	plasma membrane	91.2	91.86
CDX69928	Canola	cytosol	73.97	91.76
CDY44784	Canola	cytosol	73.97	91.76
CDY21559	Canola	cytosol	73.97	91.76
Os05t0553000-02	Rice	mitochondrion	90.48	91.3
Solyc02g091130.2.1	Tomato	unclear	90.13	91.11
PGSC0003DMT400078610	Potato	mitochondrion	90.13	91.11
TraesCS3B01G298000.1	Wheat	mitochondrion	89.95	90.93
HORVU3Hr1G063590.2	Barley	plasma membrane	89.59	90.56
TraesCS3D01G264800.2	Wheat	golgi	89.41	90.22
HORVU1Hr1G083840.2	Barley	mitochondrion	88.87	89.35
Zm00001d043834_P001	Maize	mitochondrion	90.84	88.93
TraesCS1B01G400300.1	Wheat	cytosol	70.38	87.7
AT5G08670.1	Thale cress	mitochondrion	85.1	85.25
AT5G08690.1	Thale cress	mitochondrion	85.1	85.25
CDY44783	Canola	mitochondrion	84.56	85.17
CDX78350	Canola	mitochondrion	84.56	85.02
CDY21558	Canola	mitochondrion	84.38	84.99
CDX78351	Canola	mitochondrion	84.74	84.89
CDX81118	Canola	mitochondrion	84.56	84.86
Bra009363.1-P	Field mustard	mitochondrion	84.56	84.86
CDX69929	Canola	mitochondrion	84.38	84.84
Bra006013.1-P	Field mustard	mitochondrion	84.2	84.66
AT5G08680.1	Thale cress	mitochondrion	84.92	84.62
CDX81119	Canola	mitochondrion	84.38	84.53
CDY40737	Canola	mitochondrion	84.2	84.5
CDY40736	Canola	cytosol	84.2	84.5
Bra009360.1-P	Field mustard	mitochondrion	83.66	84.27
Bra028648.1-P	Field mustard	mitochondrion	83.84	84.14
Bra028649.1-P	Field mustard	mitochondrion	81.87	80.85
KRH48739	Soybean	cytosol, mitochondrion	36.09	75.85
TraesCS4A01G151900.1	Wheat	cytosol, mitochondrion, plastid	16.88	72.31
KRH18721	Soybean	cytosol	26.57	66.97
Bra006014.1-P	Field mustard	mitochondrion	84.56	63.82
VIT_14s0068g01700.t01	Wine grape	cytosol	13.46	59.06
VIT_00s0332g00060.t01	Wine grape	mitochondrion	15.8	38.6
VIT_06s0009g03730.t01	Wine grape	cytosol	3.77	23.33
VIT_09s0054g00890.t01	Wine grape	extracellular	22.98	20.55
VIT_03s0038g02760.t01	Wine grape	cytosol	17.77	20.29
VIT_04s0008g02580.t01	Wine grape	cytosol	22.44	19.81
VIT_18s0001g01020.t01	Wine grape	cytosol, extracellular	17.77	19.68

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.10.910	Gene3D:1.10.1140.10	EntrezGene:100261031	wikigene:100261031
MapMan:2.4.6.2.2	Gene3D:2.40.10.170	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	EMBL:AM440627	InterPro:ATP_synth_F1_beta_su
InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS
ProteinID:CAN69512	ProteinID:CAN69512.1	ProteinID:CCB50859	ProteinID:CCB50859.1	UniProt:F6HFL0	EMBL:FN595752
GO:GO:0000166	GO:GO:0000275	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887
GO:GO:0045261	GO:GO:0046034	GO:GO:0046933	GO:GO:0099132	GO:GO:1902600	InterPro:IPR024034
EntrezGene:LOC100261031	wikigene:LOC100261031	HAMAP:MF_01347	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874
PFAM:PF11421	PIRSF:PIRSF039072	ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF44	SMART:SM00382
SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGR:TC53466	TIGR:TC55283	TIGRFAMs:TIGR01039
UniParc:UPI0001982973	ArrayExpress:VIT_01s0011g04490	EnsemblPlantsGene:VIT_01s0011g04490	EnsemblPlants:VIT_01s0011g04490.t01	unigene:Vvi.3479	RefSeq:XP_002283951
RefSeq:XP_002283951.1	SEG:seg	:	:	:	:

Description

ATP synthase subunit beta [Source:UniProtKB/TrEMBL;Acc:F6HFL0]

Coordinates

chr1:+:4078727..4083680

Molecular Weight (calculated)

59625.5 Da

IEP (calculated)

6.092

GRAVY (calculated)

-0.088

Length

557 amino acids

Sequence
(BLAST)

001: MASRRLLSSL LRSSVRRYSA KSPAISPRTP SPYPSSRPSP KGFLLNRAVD YATSAAAAAS PPPPPPAKGA GPSGKITDEF TGAGAIGSVC QVIGAVVDVR
101: FDEGLPPILT ALEVLDNSIR LVLEVAQHLG ENMVRTIAMD GTEGLVRGQR VLNTGSPITV PVGRATLGRI INVIGEPIDE RGEIKTDHFL PIHREAPSFV
201: DQATEQQILV TGIKVVDLLA PYQRGGKIGL FGGAGVGKTV LIMELINNVA KAHGGFSVFA GVGERTREGN DLYREMIESG VIKLGDKQSE SKCALVYGQM
301: NEPPGARARV GLTGLTVAEH FRDAEGQDVL LFIDNIFRFT QANSEVSALL GRIPSAVGYQ PTLATDLGGL QERITTTKKG SITSVQAIYV PADDLTDPAP
401: ATTFAHLDAT TVLSRQISEL GIYPAVDPLD STSRMLSPHI LGEEHYNTAR GVQKVLQNYK NLQDIIAILG MDELSEDDKL TVARARKIQR FLSQPFHVAE
501: VFTGAPGKYV ELKESITSFQ GVLDGKYDDL SEQSFYMVGG IEEVIAKAEK IAKESAA

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.