Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
extracellular:
20408568
plastid: 22065420 plastid: 23198870 plasma membrane: 23353019 plasma membrane: 23508561 nucleus: 24677780 mitochondrion: 27297264 plasma membrane: 27341663 mitochondrion: 29575040 |
msms PMID:
24677780
doi
State Key Laboratory for Agrobiotechnology, Key Laboratory of Crop Heterosis and Utilization (MOE), Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing, China; National Plant Gene Research Centre (Beijing), Beijing, China.
msms PMID:
23353019
doi
University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
23198870
doi
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID:
29575040
doi
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
msms PMID:
20408568
doi
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d038929_P001 | Maize | mitochondrion | 98.55 | 98.55 |
KXG22502 | Sorghum | mitochondrion | 97.83 | 97.83 |
KXG33146 | Sorghum | mitochondrion | 96.02 | 95.85 |
Os05t0553000-02 | Rice | mitochondrion | 95.66 | 95.83 |
Zm00001d043834_P001 | Maize | mitochondrion | 95.66 | 92.97 |
VIT_01s0011g04490.t01 | Wine grape | mitochondrion | 91.86 | 91.2 |
VIT_17s0000g02900.t01 | Wine grape | mitochondrion | 91.14 | 90.97 |
CDY44784 | Canola | cytosol | 73.42 | 90.42 |
CDY21559 | Canola | cytosol | 73.42 | 90.42 |
CDX69928 | Canola | cytosol | 73.42 | 90.42 |
PGSC0003DMT400078610 | Potato | mitochondrion | 89.51 | 89.84 |
Solyc02g091130.2.1 | Tomato | unclear | 89.51 | 89.84 |
Solyc05g008460.2.1 | Tomato | plastid | 90.24 | 89.59 |
GSMUA_Achr3P20950_001 | Banana | mitochondrion | 90.05 | 89.57 |
PGSC0003DMT400078507 | Potato | cytosol | 89.69 | 89.21 |
Solyc04g007550.2.1 | Tomato | plastid | 89.51 | 88.08 |
PGSC0003DMT400015365 | Potato | mitochondrion | 89.33 | 87.9 |
KRH35827 | Soybean | nucleus | 88.61 | 87.66 |
KRG90945 | Soybean | mitochondrion | 88.43 | 87.48 |
Bra009363.1-P | Field mustard | mitochondrion | 83.36 | 83.06 |
CDY44783 | Canola | mitochondrion | 82.82 | 82.82 |
CDX69929 | Canola | mitochondrion | 82.82 | 82.67 |
AT5G08670.1 | Thale cress | mitochondrion | 83.0 | 82.55 |
AT5G08690.1 | Thale cress | mitochondrion | 83.0 | 82.55 |
CDY21558 | Canola | mitochondrion | 82.46 | 82.46 |
CDX78350 | Canola | mitochondrion | 82.46 | 82.31 |
CDY40737 | Canola | mitochondrion | 82.46 | 82.16 |
CDY40736 | Canola | cytosol | 82.46 | 82.16 |
CDX81118 | Canola | mitochondrion | 82.46 | 82.16 |
Bra006013.1-P | Field mustard | mitochondrion | 82.1 | 81.95 |
AT5G08680.1 | Thale cress | mitochondrion | 82.82 | 81.93 |
Bra009360.1-P | Field mustard | mitochondrion | 81.92 | 81.92 |
CDX81119 | Canola | mitochondrion | 82.28 | 81.83 |
CDX78351 | Canola | mitochondrion | 82.28 | 81.83 |
Bra028648.1-P | Field mustard | mitochondrion | 82.1 | 81.8 |
GSMUA_Achr2P07890_001 | Banana | cytosol | 10.49 | 79.45 |
Bra028649.1-P | Field mustard | mitochondrion | 80.29 | 78.72 |
GRMZM5G808402_P01 | Maize | cytosol, mitochondrion, plastid | 59.13 | 65.66 |
Zm00001d006403_P001 | Maize | plastid | 59.13 | 65.66 |
Bra006014.1-P | Field mustard | mitochondrion | 82.1 | 61.52 |
Zm00001d050687_P001 | Maize | cytosol | 26.4 | 61.34 |
Zm00001d000277_P001 | Maize | plastid | 52.44 | 51.42 |
Zm00001d020223_P001 | Maize | cytosol | 10.13 | 49.56 |
Zm00001d015426_P001 | Maize | cytosol | 19.35 | 21.27 |
Zm00001d053765_P003 | Maize | cytosol | 22.97 | 20.45 |
Zm00001d036961_P004 | Maize | plasma membrane, plastid | 17.9 | 20.33 |
Zm00001d046336_P001 | Maize | cytosol | 17.9 | 19.88 |
Zm00001d015427_P001 | Maize | extracellular, plastid | 2.35 | 10.83 |
Protein Annotations
Description
csu849(atpb)ATP synthase subunit beta
Coordinates
chr8:-:67043287..67046880
Molecular Weight (calculated)
59010.8 Da
IEP (calculated)
6.210
GRAVY (calculated)
-0.077
Length
553 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRRVVSSL LRSASRLRAA SPAAPRPRGA PHRPSPAGYL FNRAAAYASA AAAQVAPATP PPATGKTGGG KITDEFTGAG AIGQVCQVIG AVVDVRYDEG
101: LPPILTALEV LDNDIRLVLE VAQHLGENMV RTIAMDGTEG LVRGQRVLNT GSPITVPVGR ATLGRIINVI GEPIDEKGDI TTNHFLPIHR EAPAFVEQAT
201: EQQILVTGIK VVDLLAPYQR GGKIGLFGGA GVGKTVLIME LINNVAKAHG GFSVFAGVGE RTREGNDLYR EMIESGVIKL GDKQSESKCA LVYGQMNEPP
301: GARARVGLTG LTVAEHFRDA EGQDVLLFID NIFRFTQANS EVSALLGRIP SAVGYQPTLA TDLGGLQERI TTTKKGSITS VQAIYVPADD LTDPAPATTF
401: AHLDATTVLS RQISELGIYP AVDPLDSTSR MLSPHVLGED HYNTARGVQK VLQNYKNLQD IIAILGMDEL SEDDKLTVAR ARKIQRFLSQ PFHVAEVFTG
501: APGKYVELKE SVKSFQGVLD GKYDDLPEQS FYMVGGIEEV IAKAEKIAKE SAS
101: LPPILTALEV LDNDIRLVLE VAQHLGENMV RTIAMDGTEG LVRGQRVLNT GSPITVPVGR ATLGRIINVI GEPIDEKGDI TTNHFLPIHR EAPAFVEQAT
201: EQQILVTGIK VVDLLAPYQR GGKIGLFGGA GVGKTVLIME LINNVAKAHG GFSVFAGVGE RTREGNDLYR EMIESGVIKL GDKQSESKCA LVYGQMNEPP
301: GARARVGLTG LTVAEHFRDA EGQDVLLFID NIFRFTQANS EVSALLGRIP SAVGYQPTLA TDLGGLQERI TTTKKGSITS VQAIYVPADD LTDPAPATTF
401: AHLDATTVLS RQISELGIYP AVDPLDSTSR MLSPHVLGED HYNTARGVQK VLQNYKNLQD IIAILGMDEL SEDDKLTVAR ARKIQRFLSQ PFHVAEVFTG
501: APGKYVELKE SVKSFQGVLD GKYDDLPEQS FYMVGGIEEV IAKAEKIAKE SAS
001: MASRRVLSSL LRSSSGRSAA KLGNRNPRLP SPSPARPAAP CSYLLGRVAE YATSSPASSA APSSAPAKDE GKKTYDYGGK GAIGRVCQVI GAIVDVRFED
101: QEGLPPIMTS LEVQDHPTRL VLEVSHHLGQ NVVRTIAMDG TEGLVRGRKV LNTGAPITVP VGRATLGRIM NVLGEPIDER GEIKTEHYLP IHRDAPALVD
201: LATGQEILAT GIKVVDLLAP YQRGGKIGLF GGAGVGKTVL IMELINNVAK AHGGFSVFAG VGERTREGND LYREMIESGV IKLGEKQSES KCALVYGQMN
301: EPPGARARVG LTGLTVAEYF RDAEGQDVLL FIDNIFRFTQ ANSEVSALLG RIPSAVGYQP TLASDLGALQ ERITTTKKGS ITSVQAIYVP ADDLTDPAPA
401: TTFAHLDATT VLSRQISELG IYPAVDPLDS TSRMLSPHIL GEEHYNTARG VQKVLQNYKN LQDIIAILGM DELSEDDKLT VARARKIQRF LSQPFHVAEI
501: FTGAPGKYVD LKENINSFQG LLDGKYDDLS EQSFYMVGGI DEVVAKAEKI AKESAA
101: QEGLPPIMTS LEVQDHPTRL VLEVSHHLGQ NVVRTIAMDG TEGLVRGRKV LNTGAPITVP VGRATLGRIM NVLGEPIDER GEIKTEHYLP IHRDAPALVD
201: LATGQEILAT GIKVVDLLAP YQRGGKIGLF GGAGVGKTVL IMELINNVAK AHGGFSVFAG VGERTREGND LYREMIESGV IKLGEKQSES KCALVYGQMN
301: EPPGARARVG LTGLTVAEYF RDAEGQDVLL FIDNIFRFTQ ANSEVSALLG RIPSAVGYQP TLASDLGALQ ERITTTKKGS ITSVQAIYVP ADDLTDPAPA
401: TTFAHLDATT VLSRQISELG IYPAVDPLDS TSRMLSPHIL GEEHYNTARG VQKVLQNYKN LQDIIAILGM DELSEDDKLT VARARKIQRF LSQPFHVAEI
501: FTGAPGKYVD LKENINSFQG LLDGKYDDLS EQSFYMVGGI DEVVAKAEKI AKESAA
Arabidopsis Description
ATP synthase alpha/beta family protein [Source:TAIR;Acc:AT5G08670]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.