Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0207500-00 | Rice | extracellular, plastid | 72.69 | 50.0 |
| Os10t0355800-00 | Rice | cytosol, extracellular, plastid | 76.47 | 43.33 |
| Os06t0120732-00 | Rice | cytosol | 28.15 | 39.88 |
| Zm00001d000277_P001 | Maize | plastid | 90.76 | 38.3 |
| GRMZM5G808402_P01 | Maize | cytosol, mitochondrion, plastid | 76.47 | 36.55 |
| Zm00001d006403_P001 | Maize | plastid | 76.47 | 36.55 |
| Zm00001d020223_P001 | Maize | cytosol | 17.23 | 36.28 |
| HORVU0Hr1G030780.2 | Barley | mitochondrion | 22.27 | 35.57 |
| Zm00001d009488_P001 | Maize | plasma membrane | 61.34 | 26.4 |
| Zm00001d038929_P001 | Maize | mitochondrion | 61.34 | 26.4 |
| Zm00001d043834_P001 | Maize | mitochondrion | 61.34 | 25.66 |
| Zm00001d015426_P001 | Maize | cytosol | 21.01 | 9.94 |
| Zm00001d036961_P004 | Maize | plasma membrane, plastid | 18.49 | 9.03 |
| Zm00001d046336_P001 | Maize | cytosol | 18.49 | 8.84 |
| Zm00001d053765_P003 | Maize | cytosol | 22.27 | 8.53 |
| Zm00001d015427_P001 | Maize | extracellular, plastid | 1.68 | 3.33 |
Protein Annotations
| KEGG:00190+3.6.3.14 | KEGG:00195+3.6.3.14 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1D6Q2W3 | ProteinID:AQK52919.1 |
| InterPro:ATP_synth_F1_dsu/esu_C | InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| InterPro:P-loop_NTPase | PFAM:PF00006 | PFAM:PF00401 | PANTHER:PTHR15184 | PANTHER:PTHR15184:SF43 | SUPFAM:SSF52540 |
| UniParc:UPI000844BD73 | EnsemblPlantsGene:Zm00001d050687 | EnsemblPlants:Zm00001d050687_P001 | EnsemblPlants:Zm00001d050687_T001 | SEG:seg | : |
Description
ATP synthase subunit beta chloroplastic
Coordinates
chr4:+:115368623..115369994
Molecular Weight (calculated)
25861.8 Da
IEP (calculated)
4.632
GRAVY (calculated)
-0.243
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MELINNIAKA HGGVSVFGRV GERTREGNDL YMEMKESGVI NEKNIEESKV ALVYGQMNEP PGARMRVGLT ALTMAEAEYF RDVNKQDVLL FIDNIFRFVQ
101: AGSEVSALLG RMPSAVGYQP TLSTEMGSLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLASKG NDAELGSDID PEEAQQALEI
201: AEANLSKAEG TKELVEAKLA LRRARIRVEA VNWIPPSY
101: AGSEVSALLG RMPSAVGYQP TLSTEMGSLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLASKG NDAELGSDID PEEAQQALEI
201: AEANLSKAEG TKELVEAKLA LRRARIRVEA VNWIPPSY
001: MTLNLCVLTP NRIVWDSEVK EIILSTNSGQ IGVLANHAPI ATAVDIGILK IRLANQWLTM ALMGGFARIG NNEITILVND AEKNSDIDPQ EAQQTLEIAE
101: ANLRKAEGKR QTIEANLALR RARTRVEALN TI
101: ANLRKAEGKR QTIEANLALR RARTRVEALN TI
Arabidopsis Description
ATPEATP synthase epsilon chain, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P09468]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.