Factsheet for GRMZM5G808402_P01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006403_P001	Maize	plastid	100.0	100.0
CAA34003	Rice	extracellular	97.39	97.39
HORVU6Hr1G049250.6	Barley	cytosol	96.79	96.79
AGP50762	Barley	plastid	96.79	96.79
TraesCS2D01G284400.1	Wheat	plastid	96.39	96.39
TraesCS1D01G181600.1	Wheat	cytosol	67.67	96.29
TraesCS2D01G584400.2	Wheat	cytosol	91.57	95.8
HORVU0Hr1G033050.1	Barley	cytosol	41.16	92.76
Zm00001d050687_P001	Maize	cytosol	36.55	76.47
HORVU0Hr1G026070.2	Barley	mitochondrion	35.54	71.66
HORVU5Hr1G064690.5	Barley	cytosol	33.94	70.71
Zm00001d000277_P001	Maize	plastid	75.9	67.02
TraesCS1D01G136000.1	Wheat	cytosol, golgi	45.78	66.86
Zm00001d038929_P001	Maize	mitochondrion	65.86	59.31
Zm00001d009488_P001	Maize	plasma membrane	65.66	59.13
Zm00001d043834_P001	Maize	mitochondrion	65.66	57.47
Zm00001d020223_P001	Maize	cytosol	10.24	45.13
Zm00001d036961_P004	Maize	plasma membrane, plastid	20.48	20.94
Zm00001d046336_P001	Maize	cytosol	20.48	20.48
Zm00001d015426_P001	Maize	cytosol	20.48	20.28
Zm00001d053765_P003	Maize	cytosol	24.3	19.48
Zm00001d015427_P001	Maize	extracellular, plastid	3.01	12.5

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	MapMan:1.1.9.2.2	Gene3D:1.10.1140.10	Gene3D:2.40.10.170	Gene3D:3.40.50.300
EntrezGene:845170	UniProt:A0A1R3NS96	InterPro:AAA+_ATPase	ProteinID:AAA85356.1	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	ProteinID:CAA60293.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006754
GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009987	GO:GO:0015986	GO:GO:0015992
GO:GO:0016020	GO:GO:0016787	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933	GO:GO:0099132
GO:GO:1902600	EnsemblPlantsGene:GRMZM5G808402	EnsemblPlants:GRMZM5G808402_P01	EnsemblPlants:GRMZM5G808402_T01	InterPro:IPR024034	HAMAP:MF_01347
ProteinID:ONM23710.1	InterPro:P-loop_NTPase	UniProt:P00827	PFAM:PF00006	PFAM:PF02874	ScanProsite:PS00152
PANTHER:PTHR15184	PANTHER:PTHR15184:SF43	SMART:SM00382	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540
TIGRFAMs:TIGR01039	UniParc:UPI0000126458	:	:	:	:

Description

atpBATP synthase subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A1R3NS96]

Coordinates

chrPt:-:54176..56114

Molecular Weight (calculated)

54044.2 Da

IEP (calculated)

5.069

GRAVY (calculated)

-0.078

Length

498 amino acids

Sequence
(BLAST)

001: MRTNPTTSRP GISTIEEKSV GRIDQIIGPV LDITFPPGKL PYIYNALIVK SRDTADKQIN VTCEVQQLLG NNRVRAVAMS ATEGLMRGME VIDTGTPLSV
101: PVGGATLGRI FNVLGEPIDN LGPVDTSATF PIHRSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEKNIEES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNKQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGSLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLASKG IYPAVDPLDS TSTMLQPRIV GNEHYETAQR VKETLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFQL ILSGELDGLP EQAFYLVGNI DEASTKAINL EEESKLKK

Best Arabidopsis Sequence Match ( ATCG00480.1 )
(BLAST)

001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK

Arabidopsis Description

ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.