Factsheet for TraesCS1D01G181600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G033050.1	Barley	cytosol	58.0	91.86
TraesCS3D01G338500.1	Wheat	cytosol	33.14	85.29
TraesCS5D01G010300.1	Wheat	cytosol	36.0	84.56
TraesCS2D01G584400.2	Wheat	cytosol	93.14	68.49
HORVU5Hr1G064690.5	Barley	cytosol	46.57	68.2
TraesCS2D01G284400.1	Wheat	plastid	96.86	68.07
CAA34003	Rice	extracellular	96.57	67.87
GRMZM5G808402_P01	Maize	cytosol, mitochondrion, plastid	96.29	67.67
Zm00001d006403_P001	Maize	plastid	96.29	67.67
TraesCS6D01G182000.1	Wheat	cytosol	28.0	67.12
TraesCS1D01G136000.1	Wheat	cytosol, golgi	61.14	62.76
HORVU0Hr1G026070.2	Barley	mitochondrion	39.14	55.47
TraesCS6D01G181900.1	Wheat	cytosol	32.0	53.08
TraesCS1D01G171700.1	Wheat	cytosol	33.43	50.65
TraesCS3D01G264800.2	Wheat	golgi	72.86	46.2
TraesCS3D01G250900.1	Wheat	cytosol	23.43	16.8
TraesCS6D01G173400.1	Wheat	cytosol, nucleus, plastid, unclear	23.14	16.6
TraesCS7D01G361000.1	Wheat	cytosol	22.86	16.39
TraesCS7D01G475900.2	Wheat	cytosol	26.0	14.8

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:3.40.50.12240	Gene3D:3.40.50.300	MapMan:35.1
InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0045261	GO:GO:0046933
InterPro:IPR024034	InterPro:P-loop_NTPase	PFAM:PF00006	ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF43
SUPFAM:SSF47917	SUPFAM:SSF52540	TIGRFAMs:TIGR01039	EnsemblPlantsGene:TraesCS1D01G181600	EnsemblPlants:TraesCS1D01G181600.1	TIGR:cd01133
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:254479918..254481020

Molecular Weight (calculated)

38001.9 Da

IEP (calculated)

4.626

GRAVY (calculated)

0.029

Length

350 amino acids

Sequence
(BLAST)

001: MSATDGLMRG MEVIDTGAPI SVLVGGATLG RIFNVLGEPV DNLGPVDNSA TFPIHRSAPA FIELDTKLSI FETDYLGGAG VGKTVLIMEL INNIAKAHGG
101: VSVFGGVGER TREGNDLYME MKESGVINEK NIEESKVALV YGQMNEPPGA RMRVGLTALT MAEYFRDVNK QDMLLFIDNI FHFVQAGSEV SALLGRMPSA
201: VGYQPTLSTE MGSLQERIAS TKKGSITSIQ AVYVPADDLT DPAPATTFAH LDATTVLSRG LASKGIYPAV DPLDSTSTML QPRIVGNEHY ETAQRVKETL
301: QRYKELQDII AILGLDELLE EDRLTVARAR KIERFLSQPF FVAEVFLLVL

Best Arabidopsis Sequence Match ( AT5G08670.1 )
(BLAST)

001: MASRRVLSSL LRSSSGRSAA KLGNRNPRLP SPSPARPAAP CSYLLGRVAE YATSSPASSA APSSAPAKDE GKKTYDYGGK GAIGRVCQVI GAIVDVRFED
101: QEGLPPIMTS LEVQDHPTRL VLEVSHHLGQ NVVRTIAMDG TEGLVRGRKV LNTGAPITVP VGRATLGRIM NVLGEPIDER GEIKTEHYLP IHRDAPALVD
201: LATGQEILAT GIKVVDLLAP YQRGGKIGLF GGAGVGKTVL IMELINNVAK AHGGFSVFAG VGERTREGND LYREMIESGV IKLGEKQSES KCALVYGQMN
301: EPPGARARVG LTGLTVAEYF RDAEGQDVLL FIDNIFRFTQ ANSEVSALLG RIPSAVGYQP TLASDLGALQ ERITTTKKGS ITSVQAIYVP ADDLTDPAPA
401: TTFAHLDATT VLSRQISELG IYPAVDPLDS TSRMLSPHIL GEEHYNTARG VQKVLQNYKN LQDIIAILGM DELSEDDKLT VARARKIQRF LSQPFHVAEI
501: FTGAPGKYVD LKENINSFQG LLDGKYDDLS EQSFYMVGGI DEVVAKAEKI AKESAA

Arabidopsis Description

ATP synthase alpha/beta family protein [Source:TAIR;Acc:AT5G08670]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.