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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 1
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G264700.1 Wheat mitochondrion 99.46 99.64
TraesCS3B01G298000.1 Wheat mitochondrion 99.28 99.46
KXG33146 Sorghum mitochondrion 94.02 93.68
Zm00001d038929_P001 Maize mitochondrion 93.66 93.49
KXG22502 Sorghum mitochondrion 92.39 92.22
Os05t0553000-02 Rice mitochondrion 91.49 91.49
Zm00001d043834_P001 Maize mitochondrion 94.02 91.21
CDX69928 Canola cytosol 72.83 89.53
CDY44784 Canola cytosol 72.83 89.53
CDY21559 Canola cytosol 72.83 89.53
VIT_01s0011g04490.t01 Wine grape mitochondrion 90.22 89.41
VIT_17s0000g02900.t01 Wine grape mitochondrion 89.49 89.17
Solyc05g008460.2.1 Tomato plastid 88.77 87.97
GSMUA_Achr3P20950_001 Banana mitochondrion 88.59 87.95
Solyc02g091130.2.1 Tomato unclear 87.5 87.66
PGSC0003DMT400078610 Potato mitochondrion 87.5 87.66
PGSC0003DMT400078507 Potato cytosol 88.22 87.59
Solyc04g007550.2.1 Tomato plastid 87.5 85.94
PGSC0003DMT400015365 Potato mitochondrion 87.32 85.77
KRH35827 Soybean nucleus 86.23 85.15
KRG90945 Soybean mitochondrion 85.87 84.79
Bra009363.1-P Field mustard mitochondrion 82.79 82.34
CDX69929 Canola mitochondrion 82.61 82.31
CDY44783 Canola mitochondrion 82.25 82.1
CDY21558 Canola mitochondrion 82.25 82.1
CDX81119 Canola mitochondrion 82.61 82.01
CDX78350 Canola mitochondrion 82.25 81.95
AT5G08680.1 Thale cress mitochondrion 82.97 81.93
CDX78351 Canola mitochondrion 82.43 81.83
CDX81118 Canola mitochondrion 82.25 81.8
AT5G08690.1 Thale cress mitochondrion 82.25 81.65
AT5G08670.1 Thale cress mitochondrion 82.25 81.65
Bra006013.1-P Field mustard mitochondrion 81.88 81.59
Bra009360.1-P Field mustard mitochondrion 81.7 81.56
CDY40736 Canola cytosol 81.88 81.44
CDY40737 Canola mitochondrion 81.88 81.44
Bra028648.1-P Field mustard mitochondrion 81.52 81.08
GSMUA_Achr2P07890_001 Banana cytosol 10.33 78.08
Bra028649.1-P Field mustard mitochondrion 79.71 78.01
TraesCS1D01G181600.1 Wheat cytosol 46.2 72.86
TraesCS5D01G010300.1 Wheat cytosol 18.3 67.79
TraesCS2D01G284400.1 Wheat plastid 58.51 64.86
TraesCS2D01G584400.2 Wheat cytosol 55.62 64.5
TraesCS3D01G338500.1 Wheat cytosol 15.22 61.76
Bra006014.1-P Field mustard mitochondrion 82.25 61.52
TraesCS6D01G182000.1 Wheat cytosol 15.22 57.53
TraesCS1D01G171700.1 Wheat cytosol 22.46 53.68
TraesCS6D01G181900.1 Wheat cytosol 20.29 53.08
TraesCS1D01G136000.1 Wheat cytosol, golgi 32.61 52.79
TraesCS7D01G475900.2 Wheat cytosol 22.83 20.49
TraesCS3D01G250900.1 Wheat cytosol 17.93 20.29
TraesCS6D01G173400.1 Wheat cytosol, nucleus, plastid, unclear 17.75 20.08
TraesCS7D01G361000.1 Wheat cytosol 17.57 19.88
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14Gene3D:1.10.1140.10MapMan:2.4.6.2.2Gene3D:2.40.10.170Gene3D:3.40.50.300
InterPro:AAA+_ATPaseInterPro:ATP_synth_F1_beta_suInterPro:ATP_synth_F1_bsuInterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_N_sfInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd
InterPro:ATPase_F1/V1_b/a_CInterPro:ATPase_a/bsu_ASGO:GO:0000166GO:GO:0000275GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0006139GO:GO:0006754GO:GO:0006810GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0015986GO:GO:0016020GO:GO:0016787
GO:GO:0016887GO:GO:0045261GO:GO:0046034GO:GO:0046933GO:GO:1902600InterPro:IPR024034
HAMAP:MF_01347InterPro:P-loop_NTPasePFAM:PF00006PFAM:PF02874PFAM:PF11421PIRSF:PIRSF039072
ScanProsite:PS00152PANTHER:PTHR15184PANTHER:PTHR15184:SF44SMART:SM00382SUPFAM:SSF47917SUPFAM:SSF50615
SUPFAM:SSF52540TIGRFAMs:TIGR01039EnsemblPlantsGene:TraesCS3D01G264800EnsemblPlants:TraesCS3D01G264800.2TIGR:cd01133SEG:seg
Description
No Description!
Coordinates
chr3D:-:366452584..366456669
Molecular Weight (calculated)
59030.7 Da
IEP (calculated)
6.307
GRAVY (calculated)
-0.081
Length
552 amino acids
Sequence
(BLAST)
001: MATRRAISSV LRTASRIRAA SPSPCPRAPL HRPSPAGFLL NRAAASYSSS AAAQAAPVTP PPTSDKHTGT KITDDFTGAG AVGEVCQVIG AVVDVRFDEG
101: LPPILTALEV LDNSIRLVLE VAQHLGENVV RTIAMDGTEG LVRGQRVLNT GSPITVPVGR ATLGRIINVI GEPIDHKGDI KTNSYLPIHR EAPAFVEQAT
201: EQQILVTGIK VVDLLAPYQR GGKIGLFGGA GVGKTVLIME LINNVAKAHG GFSVFAGVGE RTREGNDLYR EMIESGVIKL DDKQSESKCA LVYGQMNEPP
301: GARARVGLTG LTVAEHFRDA EGQDVLLFID NIFRFTQANS EVSALLGRIP SAVGYQPTLA TDLGGLQERI TTTKKGSITS VQAIYVPADD LTDPAPATTF
401: AHLDATTVLS RQISELGIYP AVDPLDSTSR MLSPHVLGEA HYNTARGVQK VLQNYKNLQD IIAILGMDEL SEDDKLTVAR ARKIQRFLSQ PFHVAEVFTG
501: APGKYVELKE GVQRSQGVLD GKYDDLSEQA FYMVGGIEEV IAKAEKIAKE NA
Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)
001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA
Arabidopsis Description
ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.