Factsheet for TraesCS1D01G136000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G064690.5	Barley	cytosol	66.86	95.4
HORVU0Hr1G033050.1	Barley	cytosol	56.01	86.43
HORVU0Hr1G026070.2	Barley	mitochondrion	55.72	76.92
TraesCS6D01G182000.1	Wheat	cytosol	27.57	64.38
TraesCS1D01G181600.1	Wheat	cytosol	62.76	61.14
TraesCS2D01G284400.1	Wheat	plastid	67.16	45.98
GRMZM5G808402_P01	Maize	cytosol, mitochondrion, plastid	66.86	45.78
Zm00001d006403_P001	Maize	plastid	66.86	45.78
TraesCS2D01G584400.2	Wheat	cytosol	63.64	45.59
CAA34003	Rice	extracellular	66.57	45.58
TraesCS3D01G264800.2	Wheat	golgi	52.79	32.61
TraesCS3D01G250900.1	Wheat	cytosol	17.6	12.3
TraesCS6D01G173400.1	Wheat	cytosol, nucleus, plastid, unclear	17.6	12.3
TraesCS7D01G361000.1	Wheat	cytosol	17.6	12.3
TraesCS7D01G475900.2	Wheat	cytosol	19.06	10.57
TraesCS5D01G010300.1	Wheat	cytosol	2.93	6.71
TraesCS3D01G338500.1	Wheat	cytosol	2.35	5.88
TraesCS1D01G171700.1	Wheat	cytosol	2.93	4.33
TraesCS6D01G181900.1	Wheat	cytosol	2.35	3.79

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	MapMan:1.1.9.2.5	Gene3D:1.10.1140.10	Gene3D:2.60.15.10	Gene3D:3.40.50.300
InterPro:ATP_synth_F1_dsu/esu	InterPro:ATP_synth_F1_dsu/esu_C	InterPro:ATP_synth_F1_dsu/esu_N	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPsynth_dsu/esu_N
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020
GO:GO:0016787	GO:GO:0045261	GO:GO:0046933	InterPro:IPR024034	InterPro:IPR036771	HAMAP:MF_00530
InterPro:P-loop_NTPase	PFAM:PD000944	PFAM:PF00006	PFAM:PF00401	PFAM:PF02823	PANTHER:PTHR15184
PANTHER:PTHR15184:SF43	SUPFAM:SSF47917	SUPFAM:SSF51344	SUPFAM:SSF52540	TIGRFAMs:TIGR01216	EnsemblPlantsGene:TraesCS1D01G136000
EnsemblPlants:TraesCS1D01G136000.1	TIGR:cd12152	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:+:180352116..180353377

Molecular Weight (calculated)

37511.0 Da

IEP (calculated)

4.647

GRAVY (calculated)

-0.100

Length

341 amino acids

Sequence
(BLAST)

001: MKESGVINEK NIEESKVALV YGQMNEPPGA RMRVGLTALT MAEYFRDVNK QDVLLFIDNI FRFVQAGSEV SALFGRMPSA VGYQPTLSTE MGSLQERIAS
101: TEKGSITLIQ EVYVPAHDLT DPAPATTFAH LDATTVLSRG LASKGIYTAV DPLDSTSTML QPLIVGNEHY ETAQRVKESL QRYKELQDII AILGLDELSE
201: EDHLTVARAR KIERFLSQPF FVAEVFTGSP GNGQIGVLPN HAPINIAVDM GPLRIRLLND QWLTAVLWSG FARIVNNEII ILGNDAELGS DIDPEEAQKA
301: LEIAEANLSK AEGTKDLVEA KLALRRARIR IEAINWIPPS N

Best Arabidopsis Sequence Match ( AT5G08670.1 )
(BLAST)

001: MASRRVLSSL LRSSSGRSAA KLGNRNPRLP SPSPARPAAP CSYLLGRVAE YATSSPASSA APSSAPAKDE GKKTYDYGGK GAIGRVCQVI GAIVDVRFED
101: QEGLPPIMTS LEVQDHPTRL VLEVSHHLGQ NVVRTIAMDG TEGLVRGRKV LNTGAPITVP VGRATLGRIM NVLGEPIDER GEIKTEHYLP IHRDAPALVD
201: LATGQEILAT GIKVVDLLAP YQRGGKIGLF GGAGVGKTVL IMELINNVAK AHGGFSVFAG VGERTREGND LYREMIESGV IKLGEKQSES KCALVYGQMN
301: EPPGARARVG LTGLTVAEYF RDAEGQDVLL FIDNIFRFTQ ANSEVSALLG RIPSAVGYQP TLASDLGALQ ERITTTKKGS ITSVQAIYVP ADDLTDPAPA
401: TTFAHLDATT VLSRQISELG IYPAVDPLDS TSRMLSPHIL GEEHYNTARG VQKVLQNYKN LQDIIAILGM DELSEDDKLT VARARKIQRF LSQPFHVAEI
501: FTGAPGKYVD LKENINSFQG LLDGKYDDLS EQSFYMVGGI DEVVAKAEKI AKESAA

Arabidopsis Description

ATP synthase alpha/beta family protein [Source:TAIR;Acc:AT5G08670]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.