Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 plastid: 14966246
plastid: 18453340
plastid: 20089766
extracellular: 20408568
plastid: 20701693
plastid: 21196305
plastid: 22065420
extracellular: 22192489
plastid: 23198870
nucleus: 24677780
mitochondrion: 27297264
plasma membrane: 27341663
msms PMID: 20701693 doi
A Campos, PK Carvajal-Vallejos, E Villalobos, CF Franco, AM Almeida, AV Coelho, JM Torné, M Santos
Instituto de Tecnologia Química e Biológica (ITQB), Universidade Nova de Lisboa, Oeiras, Portugal.
msms PMID: 24677780 doi
B Guo, Y Chen, C Li, T Wang, R Wang, B Wang, S Hu, X Du, H Xing, X Song, Y Yao, Q Sun, Z Ni
State Key Laboratory for Agrobiotechnology, Key Laboratory of Crop Heterosis and Utilization (MOE), Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing, China; National Plant Gene Research Centre (Beijing), Beijing, China.
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 20089766 doi
G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 22192489 doi
K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling
Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 14966246 doi
PM Lonosky, X Zhang, VG Honavar, DL Dobbs, A Fu, SR Rodermel
Department of Genetics, Iowa State University, Ames, Iowa 50011, USA.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
msms PMID: 18453340 doi
W Majeran, B Zybailov, AJ Ytterberg, J Dunsmore, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 21196305
XY Liu, YD Wu, ZY Shen, Z Shen, HH Li, XM Yu, XF Yan, CH Guo, BC Wang
Key Laboratory of Forest Tree Genetic Improvement and Biotechnology, Ministry of Education, Northeast Forestry University, Harbin, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GRMZM5G808402_P01 Maize cytosol, mitochondrion, plastid 100.0 100.0
CAA34003 Rice extracellular 97.39 97.39
HORVU6Hr1G049250.6 Barley cytosol 96.79 96.79
AGP50762 Barley plastid 96.79 96.79
TraesCS2D01G284400.1 Wheat plastid 96.39 96.39
TraesCS1D01G181600.1 Wheat cytosol 67.67 96.29
TraesCS2D01G584400.2 Wheat cytosol 91.57 95.8
HORVU0Hr1G033050.1 Barley cytosol 41.16 92.76
Zm00001d050687_P001 Maize cytosol 36.55 76.47
HORVU0Hr1G026070.2 Barley mitochondrion 35.54 71.66
HORVU5Hr1G064690.5 Barley cytosol 33.94 70.71
Zm00001d000277_P001 Maize plastid 75.9 67.02
TraesCS1D01G136000.1 Wheat cytosol, golgi 45.78 66.86
Zm00001d038929_P001 Maize mitochondrion 65.86 59.31
Zm00001d009488_P001 Maize plasma membrane 65.66 59.13
Zm00001d043834_P001 Maize mitochondrion 65.66 57.47
Zm00001d020223_P001 Maize cytosol 10.24 45.13
Zm00001d036961_P004 Maize plasma membrane, plastid 20.48 20.94
Zm00001d046336_P001 Maize cytosol 20.48 20.48
Zm00001d015426_P001 Maize cytosol 20.48 20.28
Zm00001d053765_P003 Maize cytosol 24.3 19.48
Zm00001d015427_P001 Maize extracellular, plastid 3.01 12.5
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14MapMan:1.1.9.2.2Gene3D:1.10.1140.10Gene3D:2.40.10.170Gene3D:3.40.50.300
EntrezGene:845170UniProt:A0A1R3NS96InterPro:AAA+_ATPaseProteinID:AAA85356.1InterPro:ATP_synth_F1_bsuInterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sfInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_F1/V1_b/a_CInterPro:ATPase_a/bsu_ASProteinID:CAA60293.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006139GO:GO:0006754
GO:GO:0006810GO:GO:0006811GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507
GO:GO:0009535GO:GO:0009536GO:GO:0009579GO:GO:0009987GO:GO:0015986GO:GO:0015992
GO:GO:0016020GO:GO:0016787GO:GO:0045261GO:GO:0046034GO:GO:0046933GO:GO:0099132
GO:GO:1902600InterPro:IPR024034HAMAP:MF_01347ProteinID:ONM23710.1InterPro:P-loop_NTPaseUniProt:P00827
PFAM:PF00006PFAM:PF02874ScanProsite:PS00152PANTHER:PTHR15184PANTHER:PTHR15184:SF43SMART:SM00382
SUPFAM:SSF47917SUPFAM:SSF50615SUPFAM:SSF52540TIGRFAMs:TIGR01039UniParc:UPI0000126458EnsemblPlantsGene:Zm00001d006403
EnsemblPlants:Zm00001d006403_P001EnsemblPlants:Zm00001d006403_T001::::
Description
atpBATP synthase subunit beta%2C chloroplastic
Coordinates
chr2:+:206607869..206609365
Molecular Weight (calculated)
54044.2 Da
IEP (calculated)
5.069
GRAVY (calculated)
-0.078
Length
498 amino acids
Sequence
(BLAST)
001: MRTNPTTSRP GISTIEEKSV GRIDQIIGPV LDITFPPGKL PYIYNALIVK SRDTADKQIN VTCEVQQLLG NNRVRAVAMS ATEGLMRGME VIDTGTPLSV
101: PVGGATLGRI FNVLGEPIDN LGPVDTSATF PIHRSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEKNIEES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNKQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGSLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLASKG IYPAVDPLDS TSTMLQPRIV GNEHYETAQR VKETLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFQL ILSGELDGLP EQAFYLVGNI DEASTKAINL EEESKLKK
Best Arabidopsis Sequence Match ( ATCG00480.1 )
(BLAST)
001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK
Arabidopsis Description
ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.