Factsheet for Zm00001d053765_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04615	Sorghum	cytosol	98.87	98.87
Zm00001d015426_P001	Maize	cytosol	79.71	98.41
GSMUA_Achr1P10520_001	Banana	plasma membrane	95.33	95.33
GSMUA_Achr9P23040_001	Banana	cytosol	95.01	95.01
GSMUA_Achr11P...	Banana	cytosol	94.85	94.85
AT1G78900.1	Thale cress	cytosol	92.27	91.97
KRH46991	Soybean	nucleus	92.11	91.81
VIT_09s0054g00890.t01	Wine grape	extracellular	91.95	91.65
Solyc12g055800.1.1	Tomato	plastid	91.95	91.65
PGSC0003DMT400074197	Potato	cytosol	91.95	91.65
Bra003633.1-P	Field mustard	cytosol	91.79	91.49
Solyc06g063330.2.1	Tomato	cytosol, unclear	91.63	91.33
KRH44667	Soybean	nucleus	91.63	91.33
PGSC0003DMT400068136	Potato	cytosol	91.63	91.33
Bra008385.1-P	Field mustard	cytosol	86.31	91.16
Bra035074.1-P	Field mustard	cytosol	91.3	91.01
VIT_04s0008g02580.t01	Wine grape	cytosol	91.95	90.49
Zm00001d015427_P001	Maize	extracellular, plastid	17.23	89.17
CDX77882	Canola	mitochondrion	12.72	36.57
Zm00001d036961_P004	Maize	plasma membrane, plastid	19.81	25.26
Zm00001d046336_P001	Maize	cytosol	19.81	24.7
GRMZM5G808402_P01	Maize	cytosol, mitochondrion, plastid	19.48	24.3
Zm00001d006403_P001	Maize	plastid	19.48	24.3
Zm00001d009488_P001	Maize	plasma membrane	20.45	22.97
Zm00001d038929_P001	Maize	mitochondrion	20.29	22.78
Zm00001d050687_P001	Maize	cytosol	8.53	22.27
Zm00001d043834_P001	Maize	mitochondrion	20.29	22.14
Zm00001d020223_P001	Maize	cytosol	3.86	21.24
Zm00001d000277_P001	Maize	plastid	17.23	18.97

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:2.40.30.20	Gene3D:2.40.50.100	MapMan:24.1.1.2.1
Gene3D:3.40.50.300	EntrezGene:542327	ProteinID:AQK60304.1	ProteinID:AQK60310.1	InterPro:ATP-synth_a_Xtn	InterPro:ATP_synth_asu-like_sf
InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_V1-cplx_asu	InterPro:ATPase_a/bsu_AS
EMBL:BT067689	UniProt:C0PHC0	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787
GO:GO:0033180	GO:GO:0046034	GO:GO:0046961	GO:GO:1902600	InterPro:IPR023366	InterPro:IPR024034
HAMAP:MF_00309	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PFAM:PF16886	ScanProsite:PS00152
PANTHER:PTHR43607	PANTHER:PTHR43607:SF3	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01042
UniParc:UPI000195CFC6	InterPro:V-ATPase_asu	EnsemblPlantsGene:Zm00001d053765	EnsemblPlants:Zm00001d053765_P003	EnsemblPlants:Zm00001d053765_T003	:

Description

vacuolar proton pump3 vacuolar proton pump3

Coordinates

chr4:-:240697275..240703366

Molecular Weight (calculated)

68451.0 Da

IEP (calculated)

5.163

GRAVY (calculated)

-0.171

Length

621 amino acids

Sequence
(BLAST)

001: MAYGDRVTTF EDSEKESEYG YVRKVSGPVV VADGMGGAAM YELVRVGHDN LIGEIIRLEG DSATIQVYEE TAGLMVNDPV LRTRKPLSVE LGPGILGNIF
101: DGIQRPLKTI AIKSGDVYIP RGVSVPALDK DVLWEFQPTK LGVGDVITGG DLYATVFENT LMQHHVALPP GSMGKISYIA PAGQYNLQDT VLELEFQGIK
201: KKFTMLQTWP VRSPRPVASK LAADTPLLTG QRVLDALFPS VLGGTCAIPG AFGCGKTVIS QALSKYSNSE AVVYVGCGER GNEMAEVLMD FPQLTMTLPD
301: GREESVMKRT TLVANTSNMP VAAREASIYT GITIAEYFRD MGYNVSMMAD STSRWAEALR EISGRLAEMP ADSGYPAYLA ARLASFYERA GKVKCLGSPD
401: RNGSVTIVGA VSPPGGDFSD PVTSATLSIV QVFWGLDKKL AQRKHFPSVN WLISYSKYSK ALESFYEKFD PDFIDIRTKA REVLQREDDL NEIVQLVGKD
501: ALAESDKITL ETAKLLREDY LAQNAFTPYD KFCPFYKSVW MMRNIIHFNT LANQAVERAA GTDGHKITYS VIKHRLGDLF YRLVSQKFED PAEGEEALVG
601: KFKKLYDDLT TGFRNLEDEA R

Best Arabidopsis Sequence Match ( AT1G78900.1 )
(BLAST)

001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIARISGDVY IPRGVSVPAL DKDCLWEFQP NKFVEGDTIT GGDLYATVFE NTLMNHLVAL PPDAMGKITY IAPAGQYSLK DTVIELEFQG
201: IKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERNGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEDTL
601: VEKFKKLYDD LNAGFRALED ETR

Arabidopsis Description

VHA-AVHA-A [Source:UniProtKB/TrEMBL;Acc:A0A178W720]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.