Factsheet for GSMUA_Achr1P10520_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	97.58	97.58
GSMUA_Achr9P23040_001	Banana	cytosol	95.97	95.97
EES04615	Sorghum	cytosol	95.49	95.49
Zm00001d053765_P003	Maize	cytosol	95.33	95.33
Zm00001d015426_P001	Maize	cytosol	77.13	95.23
EER90164	Sorghum	cytosol	95.01	95.01
Os06t0662000-01	Rice	nucleus, plasma membrane	94.69	94.84
Solyc06g063330.2.1	Tomato	cytosol, unclear	92.75	92.46
PGSC0003DMT400074197	Potato	cytosol	92.75	92.46
PGSC0003DMT400068136	Potato	cytosol	92.75	92.46
Solyc12g055800.1.1	Tomato	plastid	92.43	92.13
Os02t0175400-01	Rice	plasma membrane	92.11	92.11
VIT_09s0054g00890.t01	Wine grape	extracellular	91.95	91.65
HORVU6Hr1G069640.1	Barley	cytosol, mitochondrion	8.7	91.53
KRH46991	Soybean	nucleus	91.79	91.49
VIT_04s0008g02580.t01	Wine grape	cytosol	92.91	91.44
TraesCS7D01G475900.2	Wheat	cytosol	90.5	91.38
TraesCS7A01G489500.1	Wheat	plastid	90.5	91.38
KRH44667	Soybean	nucleus	91.47	91.17
Bra003633.1-P	Field mustard	cytosol	91.14	90.85
AT1G78900.1	Thale cress	cytosol	91.14	90.85
CDX79274	Canola	cytosol	91.14	90.85
CDY57944	Canola	cytosol	91.14	90.85
CDX87424	Canola	cytosol	90.98	90.69
CDX88489	Canola	cytosol	90.98	90.69
Bra008385.1-P	Field mustard	cytosol	85.83	90.65
Bra035074.1-P	Field mustard	cytosol	90.82	90.53
CDY67023	Canola	cytosol	73.59	90.14
Zm00001d015427_P001	Maize	extracellular, plastid	16.43	85.0
TraesCS7B01G392600.1	Wheat	plastid	91.63	83.92
HORVU7Hr1G109770.1	Barley	cytosol, mitochondrion	85.67	66.09
GSMUA_Achr1P12870_001	Banana	cytosol	18.04	26.73
GSMUA_Achr5P22160_001	Banana	cytosol	19.97	25.41
GSMUA_Achr2P16710_001	Banana	cytosol	19.81	25.2
GSMUA_Achr7P09090_001	Banana	cytosol, plasma membrane	19.65	25.0
GSMUA_Achr1P01800_001	Banana	mitochondrion	3.22	23.26
GSMUA_Achr9P21710_001	Banana	mitochondrion	20.13	22.52
GSMUA_Achr3P20950_001	Banana	mitochondrion	20.13	22.48
GSMUA_Achr8P05550_001	Banana	cytosol	19.81	22.28
GSMUA_Achr3P29100_001	Banana	mitochondrion	20.13	22.05
GSMUA_AchrUn_...	Banana	mitochondrion	18.2	20.51
GSMUA_Achr2P07900_001	Banana	mitochondrion	5.8	20.22
GSMUA_Achr1P20900_001	Banana	mitochondrion, peroxisome, plastid	1.77	19.3
GSMUA_Achr2P07890_001	Banana	cytosol	2.25	19.18
GSMUA_Achr1P20890_001	Banana	plastid	13.69	17.71
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:2.40.30.20	Gene3D:2.40.50.100	MapMan:24.1.1.2.1
Gene3D:3.40.50.300	InterPro:ATP-synth_a_Xtn	InterPro:ATP_synth_asu-like_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd
InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_V1-cplx_asu	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006139	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020
GO:GO:0016787	GO:GO:0033180	GO:GO:0046034	GO:GO:0046961	GO:GO:1902600	EnsemblPlantsGene:GSMUA_Achr1G10520_001
EnsemblPlants:GSMUA_Achr1P10520_001	EnsemblPlants:GSMUA_Achr1T10520_001	InterPro:IPR023366	InterPro:IPR024034	UniProt:M0RYR1	HAMAP:MF_00309
InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PFAM:PF16886	ScanProsite:PS00152	PANTHER:PTHR43607
PANTHER:PTHR43607:SF3	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01042	UniParc:UPI00029585D7
InterPro:V-ATPase_asu	SEG:seg	:	:	:	:

Description

V-type proton ATPase catalytic subunit A [Source:GMGC_GENE;Acc:GSMUA_Achr1G10520_001]

Coordinates

chr1:-:7940403..7948567

Molecular Weight (calculated)

68282.8 Da

IEP (calculated)

4.964

GRAVY (calculated)

-0.150

Length

621 amino acids

Sequence
(BLAST)

001: MAYGDRLTTF EDSEKESEYG YVRKVSGPVV VADGMGGAAM YELVRVGYDK LIGEIIRLEG DSATIQVYEE TAGLMVNDPV LRTRKPLSVE LGPGILGNIF
101: DGIQRPLKTI AIKSGDVYIP RGVSVPALDK DALWEFEPSK LGVGDLLTGG DLYATVFENT LMKHLVALPP GSMGKISYIA PAGQYNLNDT VLELEFQGVK
201: KQFSMLQTWP VRTPRPVAAK LAADTPLLTG QRVLDALFPS VLGGTCAIPG AFGCGKTVIS QALSKYSNSD TVVYVGCGER GNEMAEVLMD FPQLTMTLPD
301: GREESVMKRT TLVANTSNMP VAAREASIYT GITIAEYFRD MGYNVSMMAD STSRWAEALR EISGRLAEMP ADSGYPAYLA ARLASFYERA GKVKCLGGPD
401: RTGSVTIVGA VSPPGGDFSD PVTSATLGIV QVFWGLDKKL AQRKHFPSVN WLISYSKYSK ALESFYEKFD SDFIDIRTKA REVLQREDDL NEIVQLVGKD
501: ALAETDKITL ETAKLLREDY LAQNAFTPYD KFCPFYKSVW MMRNIIHFNT LANQAVERAA GSDGQKITYS VIKHRLGDLF YRLVSQKFED PAEGEEALVA
601: KFKKLNDDLT VGFRNLEDDA R

Best Arabidopsis Sequence Match ( AT1G78900.1 )
(BLAST)

001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIARISGDVY IPRGVSVPAL DKDCLWEFQP NKFVEGDTIT GGDLYATVFE NTLMNHLVAL PPDAMGKITY IAPAGQYSLK DTVIELEFQG
201: IKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERNGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEDTL
601: VEKFKKLYDD LNAGFRALED ETR

Arabidopsis Description

VHA-AVHA-A [Source:UniProtKB/TrEMBL;Acc:A0A178W720]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.