Factsheet for GSMUA_Achr1P20900_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, peroxisome, mitochondrion

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 4
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P07900_001	Banana	mitochondrion	89.47	28.65
GSMUA_Achr1P12870_001	Banana	cytosol	92.98	12.65
CDY44784	Canola	cytosol	84.21	10.69
CDX69928	Canola	cytosol	84.21	10.69
CDY21559	Canola	cytosol	84.21	10.69
Os05t0553000-02	Rice	mitochondrion	92.98	9.6
GSMUA_Achr9P21710_001	Banana	mitochondrion	92.98	9.55
GSMUA_Achr3P20950_001	Banana	mitochondrion	91.23	9.35
GSMUA_Achr3P29100_001	Banana	mitochondrion	92.98	9.35
GSMUA_AchrUn_...	Banana	mitochondrion	84.21	8.71
CDY44783	Canola	mitochondrion	84.21	8.68
CDY21558	Canola	mitochondrion	84.21	8.68
Bra009360.1-P	Field mustard	mitochondrion	84.21	8.68
CDX78350	Canola	mitochondrion	84.21	8.66
CDX69929	Canola	mitochondrion	84.21	8.66
Bra006013.1-P	Field mustard	mitochondrion	84.21	8.66
CDX81118	Canola	mitochondrion	84.21	8.65
CDY40736	Canola	cytosol	84.21	8.65
CDY40737	Canola	mitochondrion	84.21	8.65
Bra028648.1-P	Field mustard	mitochondrion	84.21	8.65
Bra009363.1-P	Field mustard	mitochondrion	84.21	8.65
CDX81119	Canola	mitochondrion	84.21	8.63
AT5G08670.1	Thale cress	mitochondrion	84.21	8.63
CDX78351	Canola	mitochondrion	84.21	8.63
AT5G08690.1	Thale cress	mitochondrion	84.21	8.63
AT5G08680.1	Thale cress	mitochondrion	84.21	8.59
Bra028649.1-P	Field mustard	mitochondrion	84.21	8.51
Bra006014.1-P	Field mustard	mitochondrion	84.21	6.5
GSMUA_Achr1P01800_001	Banana	mitochondrion	5.26	3.49
GSMUA_Achr1P10520_001	Banana	plasma membrane	19.3	1.77
GSMUA_Achr9P23040_001	Banana	cytosol	19.3	1.77
GSMUA_Achr11P...	Banana	cytosol	19.3	1.77
GSMUA_Achr2P16710_001	Banana	cytosol	14.04	1.64
GSMUA_Achr5P22160_001	Banana	cytosol	14.04	1.64
GSMUA_Achr7P09090_001	Banana	cytosol, plasma membrane	14.04	1.64
GSMUA_Achr8P05550_001	Banana	cytosol	14.04	1.45
GSMUA_Achr2P07890_001	Banana	cytosol	0.0	0.0
GSMUA_Achr1P20890_001	Banana	plastid	0.0	0.0
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr1P20900_001	EnsemblPlants:GSMUA_Achr1T20900_001	EnsemblPlantsGene:GSMUA_Achr1G20900_001	Gene3D:1.10.1140.10	InterPro:ATPase_F1/V1_b/a_C	InterPro:IPR024034
KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	PANTHER:PTHR15184	PANTHER:PTHR15184:SF8	SUPFAM:SSF47917	UniParc:UPI0002959B90
UniProt:M0S1P8	MapMan:35.1	:	:	:	:

Description

ATP synthase subunit beta, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr1G20900_001]

Coordinates

chr1:+:15711676..15713245

Molecular Weight (calculated)

6443.7 Da

IEP (calculated)

7.534

GRAVY (calculated)

-0.400

Length

57 amino acids

Sequence
(BLAST)

1: MNELSEDDKL TVARARKIQR FLSQPFHVAE VVTGVPGKYV ELKESVNSFQ GVMDGKY

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.