Factsheet for GSMUA_Achr9P21710_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P12870_001	Banana	cytosol	75.14	99.52
GSMUA_Achr3P29100_001	Banana	mitochondrion	97.12	95.06
GSMUA_Achr1P20900_001	Banana	mitochondrion, peroxisome, plastid	9.55	92.98
CDY44784	Canola	cytosol	73.87	91.31
CDY21559	Canola	cytosol	73.87	91.31
CDX69928	Canola	cytosol	73.87	91.31
GSMUA_Achr3P20950_001	Banana	mitochondrion	89.73	89.57
Bra009363.1-P	Field mustard	mitochondrion	84.32	84.32
CDY44783	Canola	mitochondrion	83.96	84.27
CDX69929	Canola	mitochondrion	83.96	84.12
CDY21558	Canola	mitochondrion	83.78	84.09
CDX78350	Canola	mitochondrion	83.78	83.94
CDX78351	Canola	mitochondrion	83.96	83.81
CDX81118	Canola	mitochondrion	83.78	83.78
CDX81119	Canola	mitochondrion	83.78	83.63
AT5G08690.1	Thale cress	mitochondrion	83.78	83.63
AT5G08670.1	Thale cress	mitochondrion	83.78	83.63
CDY40736	Canola	cytosol	83.6	83.6
CDY40737	Canola	mitochondrion	83.6	83.6
Bra006013.1-P	Field mustard	mitochondrion	83.42	83.57
Bra009360.1-P	Field mustard	mitochondrion	83.24	83.54
Bra028648.1-P	Field mustard	mitochondrion	83.42	83.42
AT5G08680.1	Thale cress	mitochondrion	83.78	83.18
GSMUA_Achr2P07900_001	Banana	mitochondrion	26.67	83.15
GSMUA_AchrUn_...	Banana	mitochondrion	81.62	82.21
Bra028649.1-P	Field mustard	mitochondrion	81.26	79.96
GSMUA_Achr2P07890_001	Banana	cytosol	10.45	79.45
GSMUA_Achr1P20890_001	Banana	plastid	62.34	72.08
Bra006014.1-P	Field mustard	mitochondrion	83.78	63.01
GSMUA_AchrUn_...	Banana	cytosol	1.8	52.63
GSMUA_Achr1P01800_001	Banana	mitochondrion	6.49	41.86
GSMUA_Achr5P22160_001	Banana	cytosol	18.38	20.9
GSMUA_Achr2P16710_001	Banana	cytosol	18.02	20.49
GSMUA_Achr9P23040_001	Banana	cytosol	22.88	20.45
GSMUA_Achr7P09090_001	Banana	cytosol, plasma membrane	17.84	20.29
GSMUA_Achr1P10520_001	Banana	plasma membrane	22.52	20.13
GSMUA_Achr11P...	Banana	cytosol	22.52	20.13
GSMUA_Achr8P05550_001	Banana	cytosol	18.38	18.48

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.10.910	Gene3D:1.10.1140.10	MapMan:2.4.6.2.2	Gene3D:2.40.10.170
Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATP_synth_F1_beta_su	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0000275	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0015992
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933
GO:GO:0099132	GO:GO:1902600	EnsemblPlantsGene:GSMUA_Achr9G21710_001	EnsemblPlants:GSMUA_Achr9P21710_001	EnsemblPlants:GSMUA_Achr9T21710_001	InterPro:IPR024034
UniProt:M0U2D0	HAMAP:MF_01347	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PFAM:PF11421
PIRSF:PIRSF039072	ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF44	SMART:SM00382	SUPFAM:SSF47917
SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01039	UniParc:UPI000295A95E	SEG:seg	:

Description

ATP synthase subunit beta, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr9G21710_001]

Coordinates

chr9:-:26842391..26846093

Molecular Weight (calculated)

59405.3 Da

IEP (calculated)

6.091

GRAVY (calculated)

-0.108

Length

555 amino acids

Sequence
(BLAST)

001: MASRRLLSSL LRSSARRSPA PRSSAAACPT PRAAPRPSPA GYLLSRAVEY ATSAAAPQPT PPPAKTPPGP SGKITDEFTG AGAIGKVCQV IGAVVDVRFN
101: EGLPPILTAL EVLDNQIRLV LEVAQHLGEN MVRTIAMDGT EGLVRGQRVL NTGSPITVPV GRATLGRIMN VIGEPIDEKG EINTNHFLPI HREAPAFVEQ
201: ATEQQILVTG IKVVDLLAPY QRGGKIGLFG GAGVGKTVLI MELINNVAKA HGGFSVFAGV GERTREGNDL YREMIESGVI KLGDKQDESK CALVYGQMNE
301: PPGARARVGL TGLTVAEHFR DAEGQDVLLF IDNIFRFTQA NSEVSALLGR IPSAVGYQPT LATDLGGLQE RITTTKKGSI TSVQAIYVPA DDLTDPAPAT
401: TFAHLDATTV LSRQISELGI YPAVDPLDST SRMLSPHVLG EEHYNTARGV QKVLQNYKNL QDIIAILGMD ELSEDDKLTV ARARKIQRFL SQPFHVAEVF
501: TGAPGKYVEL KESVNSFQGV LDGKYDDLPE QSFYMVGGIE EVIAKAEKIA KESAA

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.