Factsheet for GSMUA_Achr2P07900_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P20900_001	Banana	mitochondrion, peroxisome, plastid	28.65	89.47
GSMUA_AchrUn_...	Banana	cytosol	5.62	52.63
GSMUA_Achr1P12870_001	Banana	cytosol	80.34	34.13
CDY21559	Canola	cytosol	78.65	31.18
CDY44784	Canola	cytosol	78.65	31.18
CDX69928	Canola	cytosol	78.65	31.18
GSMUA_Achr9P21710_001	Banana	mitochondrion	83.15	26.67
CDY44783	Canola	mitochondrion	81.46	26.22
CDY21558	Canola	mitochondrion	81.46	26.22
Bra009360.1-P	Field mustard	mitochondrion	81.46	26.22
CDX69929	Canola	mitochondrion	81.46	26.17
CDX78350	Canola	mitochondrion	81.46	26.17
Bra028648.1-P	Field mustard	mitochondrion	81.46	26.13
CDX81118	Canola	mitochondrion	81.46	26.13
Bra009363.1-P	Field mustard	mitochondrion	81.46	26.13
CDY40736	Canola	cytosol	81.46	26.13
CDY40737	Canola	mitochondrion	81.46	26.13
GSMUA_Achr3P29100_001	Banana	mitochondrion	83.15	26.1
GSMUA_Achr3P20950_001	Banana	mitochondrion	81.46	26.08
CDX78351	Canola	mitochondrion	81.46	26.08
CDX81119	Canola	mitochondrion	81.46	26.08
Bra006013.1-P	Field mustard	mitochondrion	80.34	25.81
AT5G08690.1	Thale cress	mitochondrion	80.34	25.72
AT5G08670.1	Thale cress	mitochondrion	80.34	25.72
AT5G08680.1	Thale cress	mitochondrion	80.34	25.58
Bra028649.1-P	Field mustard	mitochondrion	74.16	23.4
GSMUA_AchrUn_...	Banana	mitochondrion	65.73	21.23
Bra006014.1-P	Field mustard	mitochondrion	81.46	19.65
GSMUA_Achr1P01800_001	Banana	mitochondrion	5.06	10.47
GSMUA_Achr1P20890_001	Banana	plastid	24.72	9.17
GSMUA_Achr2P07890_001	Banana	cytosol	3.37	8.22
GSMUA_Achr11P...	Banana	cytosol	20.79	5.96
GSMUA_Achr9P23040_001	Banana	cytosol	20.79	5.96
GSMUA_Achr1P10520_001	Banana	plasma membrane	20.22	5.8
GSMUA_Achr2P16710_001	Banana	cytosol	13.48	4.92
GSMUA_Achr5P22160_001	Banana	cytosol	12.92	4.71
GSMUA_Achr7P09090_001	Banana	cytosol, plasma membrane	12.92	4.71
GSMUA_Achr8P05550_001	Banana	cytosol	13.48	4.35

Protein Annotations

EnsemblPlants:GSMUA_Achr2P07900_001	EnsemblPlants:GSMUA_Achr2T07900_001	EnsemblPlantsGene:GSMUA_Achr2G07900_001	Gene3D:1.10.1140.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	InterPro:IPR024034	KEGG:00190+3.6.3.14
KEGG:00195+3.6.3.14	PANTHER:PTHR15184	PANTHER:PTHR15184:SF8	ScanProsite:PS00152	SUPFAM:SSF47917	UniParc:UPI0002958780
UniProt:M0S631	MapMan:35.1	:	:	:	:

Description

ATP synthase subunit beta, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr2G07900_001]

Coordinates

chr2:+:12134630..12137214

Molecular Weight (calculated)

19969.2 Da

IEP (calculated)

6.006

GRAVY (calculated)

-0.035

Length

178 amino acids

Sequence
(BLAST)

001: MLRGRMCFSL LTTFFTSHKR TLKCLPCLVV YPLLWYSISE LGIYPAVDPL DSTSRMLSPH MLGEEHYNTA RGVQKVLQNY KNLQDIIAIL GMDELSEDDK
101: LTVACARKIQ RFLSQPFHVA EVFTGAPGKY VELKESVHSF QGVLDGKYDD LPEQSFCMVG GIEEVVTKAE TISKEAAA

Best Arabidopsis Sequence Match ( AT5G08670.1 )
(BLAST)

001: MASRRVLSSL LRSSSGRSAA KLGNRNPRLP SPSPARPAAP CSYLLGRVAE YATSSPASSA APSSAPAKDE GKKTYDYGGK GAIGRVCQVI GAIVDVRFED
101: QEGLPPIMTS LEVQDHPTRL VLEVSHHLGQ NVVRTIAMDG TEGLVRGRKV LNTGAPITVP VGRATLGRIM NVLGEPIDER GEIKTEHYLP IHRDAPALVD
201: LATGQEILAT GIKVVDLLAP YQRGGKIGLF GGAGVGKTVL IMELINNVAK AHGGFSVFAG VGERTREGND LYREMIESGV IKLGEKQSES KCALVYGQMN
301: EPPGARARVG LTGLTVAEYF RDAEGQDVLL FIDNIFRFTQ ANSEVSALLG RIPSAVGYQP TLASDLGALQ ERITTTKKGS ITSVQAIYVP ADDLTDPAPA
401: TTFAHLDATT VLSRQISELG IYPAVDPLDS TSRMLSPHIL GEEHYNTARG VQKVLQNYKN LQDIIAILGM DELSEDDKLT VARARKIQRF LSQPFHVAEI
501: FTGAPGKYVD LKENINSFQG LLDGKYDDLS EQSFYMVGGI DEVVAKAEKI AKESAA

Arabidopsis Description

ATP synthase alpha/beta family protein [Source:TAIR;Acc:AT5G08670]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.