CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69928	Canola	cytosol	81.19	100.0
CDY44784	Canola	cytosol	81.19	100.0
CDY21559	Canola	cytosol	81.19	100.0
CDY40737	Canola	mitochondrion	99.64	99.28
CDY40736	Canola	cytosol	99.64	99.28
CDX78350	Canola	mitochondrion	98.37	98.19
CDY21558	Canola	mitochondrion	98.01	98.01
CDX81118	Canola	mitochondrion	98.19	97.84
CDX69929	Canola	mitochondrion	97.65	97.47
CDX78351	Canola	mitochondrion	97.11	96.58
AT5G08670.1	Thale cress	mitochondrion	96.93	96.4
AT5G08690.1	Thale cress	mitochondrion	96.75	96.22
CDX81119	Canola	mitochondrion	96.75	96.22
AT5G08680.1	Thale cress	mitochondrion	96.2	95.17
GSMUA_Achr1P12870_001	Banana	cytosol	70.71	93.32
VIT_17s0000g02900.t01	Wine grape	mitochondrion	84.81	84.66
VIT_01s0011g04490.t01	Wine grape	mitochondrion	85.17	84.56
TraesCS1B01G400300.1	Wheat	cytosol	68.17	84.34
GSMUA_Achr1P20900_001	Banana	mitochondrion, peroxisome, plastid	8.68	84.21
GSMUA_Achr9P21710_001	Banana	mitochondrion	84.27	83.96
KXG22502	Sorghum	mitochondrion	83.73	83.73
KRG90945	Soybean	mitochondrion	84.45	83.54
Zm00001d038929_P001	Maize	mitochondrion	83.36	83.36
KRH35827	Soybean	nucleus	84.09	83.18
PGSC0003DMT400078507	Potato	cytosol	83.36	82.91
KXG33146	Sorghum	mitochondrion	83.0	82.85
Zm00001d009488_P001	Maize	plasma membrane	82.82	82.82
Os05t0553000-02	Rice	mitochondrion	82.64	82.79
Solyc05g008460.2.1	Tomato	plastid	83.36	82.76
TraesCS3A01G264700.1	Wheat	mitochondrion	82.46	82.76
PGSC0003DMT400078610	Potato	mitochondrion	82.46	82.76
Solyc02g091130.2.1	Tomato	unclear	82.28	82.58
TraesCS3B01G298000.1	Wheat	mitochondrion	82.28	82.58
GSMUA_Achr3P20950_001	Banana	mitochondrion	82.82	82.37
TraesCS3D01G264800.2	Wheat	golgi	82.1	82.25
Solyc04g007550.2.1	Tomato	plastid	83.54	82.21
GSMUA_Achr3P29100_001	Banana	mitochondrion	84.27	82.19
PGSC0003DMT400015365	Potato	mitochondrion	83.36	82.03
HORVU1Hr1G083840.2	Barley	mitochondrion	82.1	81.95
HORVU3Hr1G063590.2	Barley	plasma membrane	81.56	81.85
GSMUA_Achr2P07900_001	Banana	mitochondrion	26.22	81.46
TraesCS1A01G379000.1	Wheat	mitochondrion	81.19	81.19
Zm00001d043834_P001	Maize	mitochondrion	82.64	80.32
GSMUA_Achr2P07890_001	Banana	cytosol	10.31	78.08
KRH48739	Soybean	cytosol, mitochondrion	35.26	73.58
GSMUA_AchrUn_...	Banana	mitochondrion	73.24	73.5
TraesCS4A01G151900.1	Wheat	cytosol, mitochondrion, plastid	17.0	72.31
KRH18721	Soybean	cytosol	25.68	64.25
GSMUA_Achr1P20890_001	Banana	plastid	54.79	63.12
CDY17918	Canola	cytosol	31.1	54.09
CDY38701	Canola	plastid	58.41	53.74
CDX98579	Canola	plastid	58.41	53.74
CDX99946	Canola	plastid	58.41	53.74
CDY21198	Canola	cytosol	20.43	48.92
CDY17919	Canola	cytosol	9.58	36.05
CDY01384	Canola	cytosol	17.0	21.66
CDX73218	Canola	cytosol	18.63	21.33
CDY51327	Canola	cytosol	18.63	21.19
CDY54328	Canola	cytosol	18.63	21.19
CDX87646	Canola	cytosol	18.63	21.11
CDX96645	Canola	cytosol	18.44	20.99
CDY29363	Canola	cytosol	18.44	20.99
CDY31899	Canola	cytosol	18.44	20.99
CDY67023	Canola	cytosol	18.81	20.51
CDX88489	Canola	cytosol	22.06	19.58
CDY57944	Canola	cytosol	22.06	19.58
CDX87424	Canola	cytosol	22.06	19.58
CDX79274	Canola	cytosol	22.06	19.58
CDX99333	Canola	mitochondrion	6.69	16.3
CDX77882	Canola	mitochondrion	4.7	12.04

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	MapMan:2.4.6.2.2	Gene3D:2.40.10.170	Gene3D:3.40.50.300
GO:A0A078I6L6	UniProt:A0A078I6L6	InterPro:AAA+_ATPase	InterPro:ATP_synth_F1_beta_su	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	EnsemblPlants:CDY44783	ProteinID:CDY44783
ProteinID:CDY44783.1	GO:GO:0000166	GO:GO:0000275	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933	GO:GO:0099132	GO:GO:1902600
EnsemblPlantsGene:GSBRNA2T00080784001	InterPro:IPR024034	HAMAP:MF_01347	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874
PFAM:PF11421	PIRSF:PIRSF039072	ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF44	MetaCyc:PWY-7219
SMART:SM00382	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01039	UniParc:UPI0004EDE7C0
SEG:seg	:	:	:	:	:

Description

BnaC02g01040DATP synthase subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A078I6L6]

Coordinates

chrLK032601:-:84521..87143

Molecular Weight (calculated)

59505.3 Da

IEP (calculated)

6.692

GRAVY (calculated)

-0.173

Length

553 amino acids

Sequence
(BLAST)

001: MASRRVLSSL LRSSSGRSAA KFGSRNPRLP SPSPARRAAP FGDLLGRVAE YSTSSPANSA APAKDEGKKK TYDYGGKGAI GKVCQVIGAI VDVRFEDQEG
101: LPPIMTSLEV QDHPTRLVLE VSHHLGQNVV RTIAMDGTEG LVRGRRVLNT GAPITVPVGR ATLGRIMNVL GEPIDERGEI KTEHYLPIHR DAPALVDLAT
201: GQEILATGIK VVDLLAPYQR GGKIGLFGGA GVGKTVLIME LINNVAKAHG GFSVFAGVGE RTREGNDLYR EMIESGVIKL GEKQSESKCA LVYGQMNEPP
301: GARARVGLTG LTVAEYFRDA EGQDVLLFID NIFRFTQANS EVSALLGRIP SAVGYQPTLA SDLGALQERI TTTKKGSITS VQAIYVPADD LTDPAPATTF
401: AHLDATTVLS RQISELGIYP AVDPLDSTSR MLSPHILGEE HYNTARGVQK VLQNYKNLQD IIAILGMDEL SEDDKLTVAR ARKIQRFLSQ PFHVAEIFTG
501: APGKYVDLKE NINSFQGLLD GKYDDLPEQS FYMVGGIDEV VAKAEKISKE AAA

Best Arabidopsis Sequence Match ( AT5G08670.1 )
(BLAST)

001: MASRRVLSSL LRSSSGRSAA KLGNRNPRLP SPSPARPAAP CSYLLGRVAE YATSSPASSA APSSAPAKDE GKKTYDYGGK GAIGRVCQVI GAIVDVRFED
101: QEGLPPIMTS LEVQDHPTRL VLEVSHHLGQ NVVRTIAMDG TEGLVRGRKV LNTGAPITVP VGRATLGRIM NVLGEPIDER GEIKTEHYLP IHRDAPALVD
201: LATGQEILAT GIKVVDLLAP YQRGGKIGLF GGAGVGKTVL IMELINNVAK AHGGFSVFAG VGERTREGND LYREMIESGV IKLGEKQSES KCALVYGQMN
301: EPPGARARVG LTGLTVAEYF RDAEGQDVLL FIDNIFRFTQ ANSEVSALLG RIPSAVGYQP TLASDLGALQ ERITTTKKGS ITSVQAIYVP ADDLTDPAPA
401: TTFAHLDATT VLSRQISELG IYPAVDPLDS TSRMLSPHIL GEEHYNTARG VQKVLQNYKN LQDIIAILGM DELSEDDKLT VARARKIQRF LSQPFHVAEI
501: FTGAPGKYVD LKENINSFQG LLDGKYDDLS EQSFYMVGGI DEVVAKAEKI AKESAA

Arabidopsis Description

ATP synthase alpha/beta family protein [Source:TAIR;Acc:AT5G08670]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.