CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P07890_001	Banana	cytosol	11.31	34.25
KRH35827	Soybean	nucleus	71.04	28.09
KRG90945	Soybean	mitochondrion	70.59	27.91
KXG22502	Sorghum	mitochondrion	68.33	27.31
KXG33146	Sorghum	mitochondrion	67.42	26.9
VIT_17s0000g02900.t01	Wine grape	mitochondrion	66.97	26.71
Solyc02g091130.2.1	Tomato	unclear	66.52	26.68
PGSC0003DMT400078610	Potato	mitochondrion	66.52	26.68
Os05t0553000-02	Rice	mitochondrion	66.52	26.63
VIT_01s0011g04490.t01	Wine grape	mitochondrion	66.97	26.57
Solyc05g008460.2.1	Tomato	plastid	65.61	26.03
Solyc04g007550.2.1	Tomato	plastid	66.06	25.98
PGSC0003DMT400015365	Potato	mitochondrion	66.06	25.98
Bra006013.1-P	Field mustard	mitochondrion	64.71	25.81
CDX78350	Canola	mitochondrion	64.71	25.81
CDX81118	Canola	mitochondrion	64.71	25.77
PGSC0003DMT400078507	Potato	cytosol	64.71	25.72
CDY21558	Canola	mitochondrion	64.25	25.68
CDY44783	Canola	mitochondrion	64.25	25.68
Bra009360.1-P	Field mustard	mitochondrion	64.25	25.68
CDX69929	Canola	mitochondrion	64.25	25.63
Bra009363.1-P	Field mustard	mitochondrion	64.25	25.59
AT5G08690.1	Thale cress	mitochondrion	64.25	25.54
CDX78351	Canola	mitochondrion	64.25	25.54
AT5G08670.1	Thale cress	mitochondrion	64.25	25.54
CDY40737	Canola	mitochondrion	63.8	25.41
CDY40736	Canola	cytosol	63.8	25.41
AT5G08680.1	Thale cress	mitochondrion	64.25	25.4
CDX81119	Canola	mitochondrion	63.8	25.36
Bra028648.1-P	Field mustard	mitochondrion	63.35	25.23
CDY44784	Canola	cytosol	50.68	24.94
CDY21559	Canola	cytosol	50.68	24.94
CDX69928	Canola	cytosol	50.68	24.94
Bra028649.1-P	Field mustard	mitochondrion	63.35	24.82
Bra006014.1-P	Field mustard	mitochondrion	64.25	19.24
KRH48739	Soybean	cytosol, mitochondrion	22.62	18.87
TraesCS4A01G151900.1	Wheat	cytosol, mitochondrion, plastid	10.41	17.69
KRH46991	Soybean	nucleus	17.65	6.26
KRH44667	Soybean	nucleus	17.65	6.26
KRH36093	Soybean	endoplasmic reticulum	12.22	5.53
KRG90658	Soybean	cytosol	12.22	5.53
KRH40221	Soybean	nucleus	12.22	5.52
KRH00994	Soybean	cytosol	12.22	5.52

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:2.40.10.170	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0GJT8
EMBL:ACUP02008120	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	EnsemblPlantsGene:GLYMA_13G078600	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015992	GO:GO:0046034	GO:GO:1902600	EnsemblPlants:KRH18721
ProteinID:KRH18721	ProteinID:KRH18721.1	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PANTHER:PTHR15184
PANTHER:PTHR15184:SF44	MetaCyc:PWY-7219	SUPFAM:SSF50615	SUPFAM:SSF52540	UniParc:UPI0006ED81B5	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:18467981..18471050

Molecular Weight (calculated)

24130.9 Da

IEP (calculated)

7.149

GRAVY (calculated)

0.271

Length

221 amino acids

Sequence
(BLAST)

001: MVVSSSLKVS CKKKKMKAEV LVFGEEMLPW SCLSPLRSVW TDEFIGKGAI GQVCQVIGVV VDVKFDEGLP PIMTALEVLD HSLRLVLECL HSIQVLVDTE
101: HYLPIHREAP AFVEQETAQQ ILVIGIKVVD LLAPYQRGGK IGLFGGAGVG KIVLIMELIN NVAKAHGMYT ESKCALVYGQ MNEPPGAHAR VGLTGLTVGE
201: HFRDIKDAMT VPKCYIYKAN S

Best Arabidopsis Sequence Match ( AT5G08690.1 )
(BLAST)

001: MASRRVLSSL LRSSSGRSAA KLVNRNPRLP SPSPARHAAP CSYLLGRVAE YATSSPASSA APSSAPAKDE GKKTYDYGGK GAIGRVCQVI GAIVDVRFED
101: QEGLPPIMTS LEVQDHPTRL VLEVSHHLGQ NVVRTIAMDG TEGLVRGRKV LNTGAPITVP VGRATLGRIM NVLGEPIDER GEIKTEHYLP IHRDAPALVD
201: LATGQEILAT GIKVVDLLAP YQRGGKIGLF GGAGVGKTVL IMELINNVAK AHGGFSVFAG VGERTREGND LYREMIESGV IKLGEKQSES KCALVYGQMN
301: EPPGARARVG LTGLTVAEYF RDAEGQDVLL FIDNIFRFTQ ANSEVSALLG RIPSAVGYQP TLASDLGALQ ERITTTKKGS ITSVQAIYVP ADDLTDPAPA
401: TTFAHLDATT VLSRQISELG IYPAVDPLDS TSRMLSPHIL GEEHYNTARG VQKVLQNYKN LQDIIAILGM DELSEDDKLT VARARKIQRF LSQPFHVAEI
501: FTGAPGKYVD LKENINSFQG LLDGKYDDLS EQSFYMVGGI DEVVAKAEKI AKESAA

Arabidopsis Description

ATP synthase subunit beta-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P83484]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.