Factsheet for VIT_17s0000g02900.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g04490.t01	Wine grape	mitochondrion	94.58	94.08
KXG22502	Sorghum	mitochondrion	92.42	92.59
KXG33146	Sorghum	mitochondrion	92.06	92.06
Zm00001d038929_P001	Maize	mitochondrion	91.7	91.86
CDX69928	Canola	cytosol	74.37	91.76
CDY44784	Canola	cytosol	74.37	91.76
CDY21559	Canola	cytosol	74.37	91.76
Zm00001d009488_P001	Maize	plasma membrane	90.97	91.14
Os05t0553000-02	Rice	mitochondrion	89.89	90.22
TraesCS3B01G298000.1	Wheat	mitochondrion	89.71	90.2
HORVU3Hr1G063590.2	Barley	plasma membrane	89.53	90.02
TraesCS3D01G264800.2	Wheat	golgi	89.17	89.49
Zm00001d043834_P001	Maize	mitochondrion	91.52	89.1
HORVU1Hr1G083840.2	Barley	mitochondrion	88.81	88.81
TraesCS1B01G400300.1	Wheat	cytosol	71.12	88.14
CDY44783	Canola	mitochondrion	84.66	84.81
AT5G08690.1	Thale cress	mitochondrion	85.02	84.71
AT5G08670.1	Thale cress	mitochondrion	85.02	84.71
CDX78351	Canola	mitochondrion	84.84	84.53
CDY21558	Canola	mitochondrion	84.3	84.45
AT5G08680.1	Thale cress	mitochondrion	85.2	84.44
CDX78350	Canola	mitochondrion	84.3	84.3
CDX69929	Canola	mitochondrion	84.3	84.3
CDX81119	Canola	mitochondrion	84.48	84.17
CDY40736	Canola	cytosol	84.3	84.14
Bra009363.1-P	Field mustard	mitochondrion	84.3	84.14
CDX81118	Canola	mitochondrion	84.3	84.14
Bra028648.1-P	Field mustard	mitochondrion	84.3	84.14
CDY40737	Canola	mitochondrion	84.3	84.14
Bra006013.1-P	Field mustard	mitochondrion	83.94	83.94
Bra009360.1-P	Field mustard	mitochondrion	83.75	83.91
Bra028649.1-P	Field mustard	mitochondrion	81.95	80.5
KRH48739	Soybean	cytosol, mitochondrion	36.1	75.47
TraesCS4A01G151900.1	Wheat	cytosol, mitochondrion, plastid	16.97	72.31
KRH18721	Soybean	cytosol	26.71	66.97
Bra006014.1-P	Field mustard	mitochondrion	84.66	63.55
VIT_14s0068g01700.t01	Wine grape	cytosol	13.54	59.06
VIT_00s0332g00060.t01	Wine grape	mitochondrion	15.7	38.16
VIT_06s0009g03730.t01	Wine grape	cytosol	3.79	23.33
VIT_09s0054g00890.t01	Wine grape	extracellular	23.29	20.71
VIT_03s0038g02760.t01	Wine grape	cytosol	17.69	20.08
VIT_04s0008g02580.t01	Wine grape	cytosol	22.74	19.97
VIT_18s0001g01020.t01	Wine grape	cytosol, extracellular	17.69	19.48

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	EntrezGene:100259544	wikigene:100259544	MapMan:2.4.6.2.2
Gene3D:2.40.10.170	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATP_synth_F1_beta_su	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	ProteinID:CCB43256	ProteinID:CCB43256.1
UniProt:F6GTT2	EMBL:FN594950	GO:GO:0000166	GO:GO:0000275	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0006811
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009987	GO:GO:0015986	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933	GO:GO:0099132	GO:GO:1902600
InterPro:IPR024034	EntrezGene:LOC100259544	wikigene:LOC100259544	HAMAP:MF_01347	InterPro:P-loop_NTPase	PFAM:PF00006
PFAM:PF02874	PFAM:PF11421	PIRSF:PIRSF039072	ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF44
SMART:SM00382	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGR:TC63054	TIGRFAMs:TIGR01039
UniParc:UPI0001984FEC	ArrayExpress:VIT_17s0000g02900	EnsemblPlantsGene:VIT_17s0000g02900	EnsemblPlants:VIT_17s0000g02900.t01	unigene:Vvi.7062	RefSeq:XP_002280824
RefSeq:XP_002280824.1	SEG:seg	:	:	:	:

Description

ATP synthase subunit beta [Source:UniProtKB/TrEMBL;Acc:F6GTT2]

Coordinates

chr17:-:2692174..2698467

Molecular Weight (calculated)

59183.1 Da

IEP (calculated)

6.210

GRAVY (calculated)

-0.050

Length

554 amino acids

Sequence
(BLAST)

001: MASRKLLSSL LRTSVRRPIS RSVLSNPRSP LPRPSPVGHL LARAANYASS ASAAAPAAST PSAAKGAGPS GKITDEFTGA GAIGQVCQVI GAVVDVRFDE
101: GLPPILTALE VLDNSIRLVL EVAQHLGENM VRTIAMDGTE GLVRGQRVLN TGSPITVPVG RATLGRIINV IGEPIDERGD IKTDHFLPIH REAPSFVDQA
201: TEQQILVTGI KVVDLLAPYQ RGGKIGLFGG AGVGKTVLIM ELINNVAKAH GGFSVFAGVG ERTREGNDLY REMIESGVIK LGEKQSESKC ALVYGQMNEP
301: PGARARVGLT GLTVAEHFRD AEGQDVLLFI DNIFRFTQAN SEVSALLGRI PSAVGYQPTL ATDLGGLQER ITTTKKGSIT SVQAIYVPAD DLTDPAPATT
401: FAHLDATTVL SRQISELGIY PAVDPLDSTS RMLSPHILGE EHYNTARGVQ KVLQNYKNLQ DIIAILGMDE LSEDDKLTVA RARKIQRFLS QPFHVAEVFT
501: GAPGKYVELK ESITSFQGVL DGKYDDLSEQ SFYMVGGIEE VIAKAEKIAK ESAA

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.