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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
 mitochondrion: 14690504
extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
nucleus: 24677780
mitochondrion: 27297264
plasma membrane: 27341663
cytosol: 28250383
mitochondrion: 29575040
msms PMID: 24677780 doi
B Guo, Y Chen, C Li, T Wang, R Wang, B Wang, S Hu, X Du, H Xing, X Song, Y Yao, Q Sun, Z Ni
State Key Laboratory for Agrobiotechnology, Key Laboratory of Crop Heterosis and Utilization (MOE), Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing, China; National Plant Gene Research Centre (Beijing), Beijing, China.
msms PMID: 28250383 doi
CN Meisrimler, F Buck, S Lüthje
University Hospital Eppendorf, Institute of Clinical Chemistry, Campus Science, Martinistraße 52, D-20246 Hamburg, Germany. buck@uke.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. c_m_2406@yahoo.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. s.luthje@botanik.uni-hamburg.de.
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 14690504
F Hochholdinger, L Guo, PS Schnable
Department of Agronomy, Iowa State University, Ames, IA 50011, USA.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 29575040 doi
WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 23508561 doi
Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck
Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG22502 Sorghum mitochondrion 98.55 98.55
Zm00001d009488_P001 Maize plasma membrane 98.55 98.55
KXG33146 Sorghum mitochondrion 96.75 96.57
Os05t0553000-02 Rice mitochondrion 95.48 95.65
TraesCS3B01G298000.1 Wheat mitochondrion 94.03 94.37
TraesCS3A01G264700.1 Wheat mitochondrion 93.85 94.19
Zm00001d043834_P001 Maize mitochondrion 96.75 94.02
HORVU3Hr1G063590.2 Barley plasma membrane 93.49 93.83
TraesCS3D01G264800.2 Wheat golgi 93.49 93.66
HORVU1Hr1G083840.2 Barley mitochondrion 92.95 92.78
TraesCS1A01G379000.1 Wheat mitochondrion 92.04 92.04
VIT_01s0011g04490.t01 Wine grape mitochondrion 92.59 91.92
VIT_17s0000g02900.t01 Wine grape mitochondrion 91.86 91.7
CDX69928 Canola cytosol 73.42 90.42
CDY21559 Canola cytosol 73.42 90.42
CDY44784 Canola cytosol 73.42 90.42
GSMUA_Achr3P20950_001 Banana mitochondrion 90.42 89.93
Solyc05g008460.2.1 Tomato plastid 90.42 89.77
PGSC0003DMT400078610 Potato mitochondrion 89.33 89.66
Solyc02g091130.2.1 Tomato unclear 89.33 89.66
PGSC0003DMT400078507 Potato cytosol 89.87 89.39
TraesCS1B01G400300.1 Wheat cytosol 72.15 89.26
Solyc04g007550.2.1 Tomato plastid 89.69 88.26
PGSC0003DMT400015365 Potato mitochondrion 89.51 88.08
KRH35827 Soybean nucleus 88.79 87.84
KRG90945 Soybean mitochondrion 88.43 87.48
Bra009363.1-P Field mustard mitochondrion 83.91 83.6
CDY44783 Canola mitochondrion 83.36 83.36
AT5G08670.1 Thale cress mitochondrion 83.73 83.27
AT5G08690.1 Thale cress mitochondrion 83.73 83.27
CDX69929 Canola mitochondrion 83.36 83.21
CDY21558 Canola mitochondrion 83.0 83.0
CDX78350 Canola mitochondrion 83.0 82.85
CDY40737 Canola mitochondrion 83.0 82.7
CDY40736 Canola cytosol 83.0 82.7
CDX81118 Canola mitochondrion 83.0 82.7
AT5G08680.1 Thale cress mitochondrion 83.54 82.65
CDX78351 Canola mitochondrion 83.0 82.55
Bra006013.1-P Field mustard mitochondrion 82.64 82.49
Bra009360.1-P Field mustard mitochondrion 82.46 82.46
CDX81119 Canola mitochondrion 82.82 82.37
Bra028648.1-P Field mustard mitochondrion 82.64 82.34
Bra028649.1-P Field mustard mitochondrion 80.83 79.26
GSMUA_Achr2P07890_001 Banana cytosol 10.31 78.08
GRMZM5G808402_P01 Maize cytosol, mitochondrion, plastid 59.31 65.86
Zm00001d006403_P001 Maize plastid 59.31 65.86
Bra006014.1-P Field mustard mitochondrion 82.82 62.06
Zm00001d050687_P001 Maize cytosol 26.4 61.34
Zm00001d000277_P001 Maize plastid 52.44 51.42
Zm00001d020223_P001 Maize cytosol 10.13 49.56
Zm00001d015426_P001 Maize cytosol 19.17 21.07
Zm00001d036961_P004 Maize plasma membrane, plastid 17.9 20.33
Zm00001d053765_P003 Maize cytosol 22.78 20.29
Zm00001d046336_P001 Maize cytosol 17.9 19.88
Zm00001d015427_P001 Maize extracellular, plastid 2.35 10.83
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14Gene3D:1.10.1140.10MapMan:2.4.6.2.2Gene3D:2.40.10.170Gene3D:3.40.50.300
EntrezGene:542267InterPro:AAA+_ATPaseProteinID:AQK88254.1InterPro:ATP_synth_F1_beta_suInterPro:ATP_synth_F1_bsuInterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sfInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_F1/V1_b/a_CInterPro:ATPase_a/bsu_ASEMBL:BT060938UniProt:C0HF32
GO:GO:0000166GO:GO:0000275GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0005743GO:GO:0006139GO:GO:0006754GO:GO:0006810GO:GO:0006811GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0015986GO:GO:0015992GO:GO:0016020
GO:GO:0016787GO:GO:0016887GO:GO:0045261GO:GO:0046034GO:GO:0046933GO:GO:0099132
GO:GO:1902600InterPro:IPR024034EMBL:M36087HAMAP:MF_01347InterPro:P-loop_NTPaseUniProt:P19023
PFAM:PF00006PFAM:PF02874PFAM:PF11421PIRSF:PIRSF039072ScanProsite:PS00152PANTHER:PTHR15184
PANTHER:PTHR15184:SF44SMART:SM00382SUPFAM:SSF47917SUPFAM:SSF50615SUPFAM:SSF52540TIGRFAMs:TIGR01039
UniParc:UPI00000616CCEMBL:X54233EnsemblPlantsGene:Zm00001d038929EnsemblPlants:Zm00001d038929_P001EnsemblPlants:Zm00001d038929_T001SEG:seg
Description
ATP synthase2ATP synthase2
Coordinates
chr6:-:167164721..167168568
Molecular Weight (calculated)
59106.9 Da
IEP (calculated)
6.370
GRAVY (calculated)
-0.092
Length
553 amino acids
Sequence
(BLAST)
001: MASRRVVSSL LRSASRLRAA SPAAPRPRAP PHRPSPAGYL FNRAAAYASS AAAQAAPATP PPATGKTGGG KITDEFTGAG AIGQVCQVIG AVVDVRFDEG
101: LPPILTALEV LDNNIRLVLE VAQHLGENMV RTIAMDGTEG LVRGQRVLNT GSPITVPVGR ATLGRIINVI GEPIDEKGDI KTNHFLPIHR EAPAFVEQAT
201: EQQILVTGIK VVDLLAPYQR GGKIGLFGGA GVGKTVLIME LINNVAKAHG GFSVFAGVGE RTREGNDLYR EMIESGVIKL DDKQSESKCA LVYGQMNEPP
301: GARARVGLTG LTVAEHFRDA EGQDVLLFID NIFRFTQANS EVSALLGRIP SAVGYQPTLA TDLGGLQERI TTTKKGSITS VQAIYVPADD LTDPAPATTF
401: AHLDATTVLS RQISELGIYP AVDPLDSTSR MLSPHVLGED HYNTARGVQK VLQNYKNLQD IIAILGMDEL SEDDKLTVAR ARKIQRFLSQ PFHVAEVFTG
501: APGKYVELKE SVKSFQGVLD GKYDDLPEQS FYMVGGIEEV IAKAEKIAKE SAS
Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)
001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA
Arabidopsis Description
ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.