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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
 plastid: 16595579
extracellular: 19786127
mitochondrion: 21043471
golgi: 23128297
mitochondrion: 23895732
golgi: 25769308
unclear: 25769308
mitochondrion: 26136264
nucleus: 26579155
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID: 19786127 doi
FJ Kong, A Oyanagi, S Komatsu
National Institute of Crop Science, Tsukuba 305-8518, Japan.
msms PMID: 21043471 doi
RP Jacoby, AH Millar, NL Taylor
ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks, M316, The University of Western Australia, 35 Stirling Highway, Crawley,WA 6009, Australia.
msms PMID: 23895732 doi
RP Jacoby, AH Millar, NL Taylor
ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks (CABiN), M316, The University of Western Australia , 35 Stirling Highway, Crawley, WA 6009, Australia.
msms PMID: 26136264 doi
S Wang, G Zhang, Y Zhang, Q Song, Z Chen, J Wang, J Guo, N Niu, J Wang, S Ma
College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.
msms PMID: 26579155 doi
T Bonnot, E Bancel, C Chambon, J Boudet, G Branlard, P Martre
Metabolism Exploration Platform Proteomic Component, Institut National de la Recherche Agronomique Saint-Genès Champanelle, France., UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Institut National de la Recherche Agronomique Clermont-Ferrand, France ; UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Blaise Pascal University Aubière, France.
msms PMID: 16595579 doi
Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman
Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.
msms, gfp PMID: 23128297 doi
M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU1Hr1G083840.2 Barley mitochondrion 96.93 96.75
HORVU3Hr1G063590.2 Barley plasma membrane 93.67 94.01
TraesCS1B01G400300.1 Wheat cytosol 75.41 93.29
TraesCS3A01G264700.1 Wheat mitochondrion 92.95 93.28
Zm00001d038929_P001 Maize mitochondrion 92.04 92.04
Os05t0553000-02 Rice mitochondrion 90.78 90.94
Zm00001d043834_P001 Maize mitochondrion 91.32 88.75
CDY21559 Canola cytosol 71.97 88.64
CDY44784 Canola cytosol 71.97 88.64
CDX69928 Canola cytosol 71.97 88.64
KRH35827 Soybean nucleus 85.53 84.62
KRG90945 Soybean mitochondrion 85.35 84.44
AT5G08690.1 Thale cress mitochondrion 81.92 81.47
AT5G08670.1 Thale cress mitochondrion 81.92 81.47
Bra009363.1-P Field mustard mitochondrion 81.74 81.44
CDX69929 Canola mitochondrion 81.37 81.23
AT5G08680.1 Thale cress mitochondrion 82.1 81.22
CDY44783 Canola mitochondrion 81.19 81.19
CDY21558 Canola mitochondrion 81.19 81.19
CDX78350 Canola mitochondrion 81.19 81.05
CDX81119 Canola mitochondrion 81.37 80.94
CDX78351 Canola mitochondrion 81.37 80.94
CDX81118 Canola mitochondrion 81.19 80.9
Bra006013.1-P Field mustard mitochondrion 80.83 80.69
Bra009360.1-P Field mustard mitochondrion 80.65 80.65
CDY40737 Canola mitochondrion 80.83 80.54
CDY40736 Canola cytosol 80.83 80.54
Bra028648.1-P Field mustard mitochondrion 80.47 80.18
Bra028649.1-P Field mustard mitochondrion 78.48 76.95
TraesCS4A01G151900.1 Wheat cytosol, mitochondrion, plastid 17.0 72.31
Bra006014.1-P Field mustard mitochondrion 81.19 60.84
TraesCS3A01G250500.1 Wheat extracellular 17.9 20.29
TraesCS6A01G186300.1 Wheat cytosol 17.72 20.08
TraesCS7A01G489500.1 Wheat plastid 22.24 20.0
TraesCS7A01G362000.1 Wheat cytosol 17.54 19.88
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14Gene3D:1.10.1140.10MapMan:2.4.6.2.2Gene3D:2.40.10.170Gene3D:3.40.50.300
InterPro:AAA+_ATPaseInterPro:ATP_synth_F1_beta_suInterPro:ATP_synth_F1_bsuInterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_N_sfInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd
InterPro:ATPase_F1/V1_b/a_CInterPro:ATPase_a/bsu_ASGO:GO:0000166GO:GO:0000275GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0006139GO:GO:0006754GO:GO:0006810GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0015986GO:GO:0016020GO:GO:0016787
GO:GO:0016887GO:GO:0045261GO:GO:0046034GO:GO:0046933GO:GO:1902600InterPro:IPR024034
HAMAP:MF_01347InterPro:P-loop_NTPasePFAM:PF00006PFAM:PF02874PFAM:PF11421PIRSF:PIRSF039072
ScanProsite:PS00152PANTHER:PTHR15184PANTHER:PTHR15184:SF44SMART:SM00382SUPFAM:SSF47917SUPFAM:SSF50615
SUPFAM:SSF52540TIGRFAMs:TIGR01039EnsemblPlantsGene:TraesCS1A01G379000EnsemblPlants:TraesCS1A01G379000.1TIGR:cd01133SEG:seg
Description
No Description!
Coordinates
chr1A:-:551320471..551323724
Molecular Weight (calculated)
59165.9 Da
IEP (calculated)
5.965
GRAVY (calculated)
-0.053
Length
553 amino acids
Sequence
(BLAST)
001: MATRRALSSL LRSASRARAA SPSPLPRAAP LHRPSPAGYL FNRAANYASA AAAAEAPAEK LPPTSDKYVG AKITDEFTGA GSIGQVCQVI GAVVDVRFDE
101: GLPPILTALE VLDNSIRLVL EVAQHLGENV VRTIAMDGTE GLVRGQKVLN TGSPITVPVG RATLGRIINV IGEPIDHKGD IKTHDFLPIH REAPAFVEQA
201: TEQQILVTGI KVVDLLAPYQ RGGKIGLFGG AGVGKTVLIM ELINNVAKAH GGFSVFAGVG ERTREGNDLY REMIESGVIK LDEKQAESKC ALVYGQMNEP
301: PGARARVGLT GLTVAEHFRD AEGQDVLLFI DNIFRFTQAN SEVSALLGRI PSAVGYQPTL ATDLGGLQER ITTTKKGSIT SVQAIYVPAD DLTDPAPATT
401: FAHLDATTVL SRQISELGIY PAVDPLDSTS RMLSPHVLGV DHYNTARGVQ KVLQNYKNLQ DIIAILGMDE LSEDDKMTVA RARKIQKFLS QPFHVAEVFT
501: GAPGKYVDLK EGVQSFQGVL DGKYDDISEH AFYMVGGIDE VIAKAEKIAS ENA
Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)
001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA
Arabidopsis Description
ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.