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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 9
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
mitochondrion: 15069638
plastid: 15069638
nucleus: 15276429
mitochondrion: 15276442
mitochondrion: 16429260
plastid: 17189339
mitochondrion: 19010998
plastid: 21433289
mitochondrion: 23027867
extracellular: 23159799
nucleus: 24133045
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797
extracellular: 28232208
msms PMID: 15276442 doi
BK Kristensen, P Askerlund, NV Bykova, H Egsgaard, IM Møller
Risø National Laboratory, Plant Research Department, P.O. Box 49, DK-4000 Roskilde, Denmark.
msms PMID: 24133045 doi
DK Jaiswal, D Ray, MK Choudhary, P Subba, A Kumar, J Verma, R Kumar, A Datta, S Chakraborty, N Chakraborty
National Institute of Plant Genome Research, New Delhi, India.
msms PMID: 23027867 doi
G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 16429260 doi
KA Howell, AH Millar, J Whelan
ARC Centre of Excellence in Plant Energy Biology, CMS Building M310, University of Western Australia, 35 Stirling Hwy, Perth, WA 6009, Australia.
msms PMID: 15276429 doi
MM Khan, S Komatsu
Department of Molecular Genetics, National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba 305-8602, Japan.
msms PMID: 15069638 doi
N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu
Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 23159799 doi
SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID: 19010998 doi
S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 21433289 doi
S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
msms PMID: 17189339 doi
T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky
Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009488_P001 Maize plasma membrane 95.83 95.66
Zm00001d038929_P001 Maize mitochondrion 95.65 95.48
KXG22502 Sorghum mitochondrion 95.47 95.3
KXG33146 Sorghum mitochondrion 95.29 94.95
GSMUA_Achr1P20900_001 Banana mitochondrion, peroxisome, plastid 9.6 92.98
TraesCS3B01G298000.1 Wheat mitochondrion 92.03 92.2
HORVU3Hr1G063590.2 Barley plasma membrane 91.85 92.01
TraesCS3A01G264700.1 Wheat mitochondrion 91.85 92.01
Zm00001d043834_P001 Maize mitochondrion 94.75 91.92
HORVU1Hr1G083840.2 Barley mitochondrion 92.03 91.7
TraesCS3D01G264800.2 Wheat golgi 91.49 91.49
CDX69928 Canola cytosol 74.09 91.09
CDY21559 Canola cytosol 74.09 91.09
CDY44784 Canola cytosol 74.09 91.09
TraesCS1A01G379000.1 Wheat mitochondrion 90.94 90.78
VIT_01s0011g04490.t01 Wine grape mitochondrion 91.3 90.48
VIT_17s0000g02900.t01 Wine grape mitochondrion 90.22 89.89
Solyc02g091130.2.1 Tomato unclear 89.49 89.66
PGSC0003DMT400078610 Potato mitochondrion 89.31 89.47
Solyc05g008460.2.1 Tomato plastid 90.22 89.41
PGSC0003DMT400078507 Potato cytosol 89.67 89.03
TraesCS1B01G400300.1 Wheat cytosol 71.74 88.59
Solyc04g007550.2.1 Tomato plastid 89.31 87.72
PGSC0003DMT400015365 Potato mitochondrion 89.13 87.54
KRH35827 Soybean nucleus 88.04 86.94
KRG90945 Soybean mitochondrion 87.68 86.58
CDY44783 Canola mitochondrion 82.79 82.64
Bra009363.1-P Field mustard mitochondrion 82.97 82.52
AT5G08690.1 Thale cress mitochondrion 82.97 82.37
AT5G08670.1 Thale cress mitochondrion 82.97 82.37
CDX81119 Canola mitochondrion 82.97 82.37
CDX69929 Canola mitochondrion 82.61 82.31
CDX78350 Canola mitochondrion 82.61 82.31
CDY21558 Canola mitochondrion 82.43 82.28
CDY40737 Canola mitochondrion 82.61 82.16
CDX81118 Canola mitochondrion 82.61 82.16
CDY40736 Canola cytosol 82.61 82.16
AT5G08680.1 Thale cress mitochondrion 83.15 82.11
CDX78351 Canola mitochondrion 82.61 82.01
Bra006013.1-P Field mustard mitochondrion 82.25 81.95
Bra028648.1-P Field mustard mitochondrion 82.25 81.8
Bra009360.1-P Field mustard mitochondrion 81.88 81.74
Bra028649.1-P Field mustard mitochondrion 80.43 78.72
KRH48739 Soybean cytosol, mitochondrion 36.41 75.85
Os12t0207500-00 Rice extracellular, plastid 46.56 74.28
TraesCS4A01G151900.1 Wheat cytosol, mitochondrion, plastid 17.03 72.31
Os10t0355800-00 Rice cytosol, extracellular, plastid 53.99 70.95
GSMUA_Achr1P20890_001 Banana plastid 59.78 68.75
Os06t0120732-00 Rice cytosol 20.29 66.67
KRH18721 Soybean cytosol 26.63 66.52
CAA34003 Rice extracellular 59.06 65.46
Bra006014.1-P Field mustard mitochondrion 82.43 61.65
Os01t0711000-01 Rice plastid 18.12 20.49
Os06t0662000-01 Rice nucleus, plasma membrane 22.83 20.32
Os02t0175400-01 Rice plasma membrane 22.83 20.29
Os06t0568200-01 Rice nucleus, plasma membrane, vacuole 17.93 20.29
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14Gene3D:1.10.1140.10MapMan:2.4.6.2.2Gene3D:2.40.10.170Gene3D:3.40.50.300
EntrezGene:4339546UniProt:A0A067Y2M2InterPro:AAA+_ATPaseProteinID:AAT58723.1ProteinID:AAT85199.1EMBL:AK061681
InterPro:ATP_synth_F1_beta_suInterPro:ATP_synth_F1_bsuInterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_N_sfInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_F1/V1_b/a_C
InterPro:ATPase_a/bsu_ASProteinID:BAA01372.1ProteinID:BAF18175.1ProteinID:BAS95236.1GO:GO:0000166GO:GO:0000275
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005743GO:GO:0006139
GO:GO:0006754GO:GO:0006810GO:GO:0006811GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0015986GO:GO:0016020GO:GO:0016787GO:GO:0016887GO:GO:0045261
GO:GO:0046034GO:GO:0046933GO:GO:0099132GO:GO:1902600InterPro:IPR024034EMBL:KF214533
HAMAP:MF_01347EnsemblPlantsGene:Os05g0553000EnsemblPlants:Os05t0553000-02InterPro:P-loop_NTPasePFAM:PF00006PFAM:PF02874
PFAM:PF11421PIRSF:PIRSF039072ScanProsite:PS00152PANTHER:PTHR15184PANTHER:PTHR15184:SF44UniProt:Q01859
SMART:SM00382SUPFAM:SSF47917SUPFAM:SSF50615SUPFAM:SSF52540TIGRFAMs:TIGR01039UniParc:UPI00003B3389
RefSeq:XP_015640019.1SEG:seg::::
Description
mitochondrial ATP synthase b, "mitochondrial ATP synthase complex, beta subunit", mitochondrial F1-ATPase beta subunit, H+-transporting ATP synthase beta chain, beta subunit of ATP synthaseSimilar to ATP synthase subunit beta, mitochondrial. (Os05t0553000-01);ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14). (Os05t0553000-02)
Coordinates
chr5:-:27509817..27513277
Molecular Weight (calculated)
58937.7 Da
IEP (calculated)
6.308
GRAVY (calculated)
-0.085
Length
552 amino acids
Sequence
(BLAST)
001: MATRRALSSL VRAASRLRGA SPAPRPRGPL HRPSPSGYLF NRAAAYATAA AAKEAAPPAP ATGKATGGGK ITDEFTGAGA VGQVCQVIGA VVDVRFDEGL
101: PPILTALEVL DHNIRLVLEV AQHLGENMVR TIAMDGTEGL VRGQRVLNTG SPITVPVGRA TLGRIMNVIG EPIDEKGDIT TNHFLPIHRE APAFVEQATE
201: QQILVTGIKV VDLLAPYQRG GKIGLFGGAG VGKTVLIMEL INNVAKAHGG FSVFAGVGER TREGNDLYRE MIESGVIKLG DKQSESKCAL VYGQMNEPPG
301: ARARVGLTGL TVAEHFRDAE GQDVLLFIDN IFRFTQANSE VSALLGRIPS AVGYQPTLAT DLGGLQERIT TTKKGSITSV QAIYVPADDL TDPAPATTFA
401: HLDATTVLSR QISELGIYPA VDPLDSTSRM LSPHVLGEDH YNTARGVQKV LQNYKNLQDI IAILGMDELS EDDKLTVARA RKIQRFLSQP FHVAEVFTGA
501: PGKYVELKES VNSFQGVLDG KYDDLPEQSF YMVGGIEEVI AKAEKIAKES AS
Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)
001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA
Arabidopsis Description
ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.