Factsheet for Os02t0175400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 4
vacuole 1
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04615	Sorghum	cytosol	94.36	94.36
Zm00001d015426_P001	Maize	cytosol	76.33	94.23
Os06t0662000-01	Rice	nucleus, plasma membrane	94.04	94.19
GSMUA_Achr1P10520_001	Banana	plasma membrane	92.11	92.11
GSMUA_Achr9P23040_001	Banana	cytosol	92.11	92.11
GSMUA_Achr11P...	Banana	cytosol	92.11	92.11
TraesCS7D01G475900.2	Wheat	cytosol	90.98	91.87
TraesCS7A01G489500.1	Wheat	plastid	90.98	91.87
PGSC0003DMT400074197	Potato	cytosol	89.86	89.57
VIT_09s0054g00890.t01	Wine grape	extracellular	89.69	89.41
Solyc12g055800.1.1	Tomato	plastid	89.69	89.41
KRH46991	Soybean	nucleus	89.69	89.41
Solyc06g063330.2.1	Tomato	cytosol, unclear	89.53	89.25
PGSC0003DMT400068136	Potato	cytosol	89.53	89.25
Bra008385.1-P	Field mustard	cytosol	84.38	89.12
AT1G78900.1	Thale cress	cytosol	89.37	89.09
Bra003633.1-P	Field mustard	cytosol	89.21	88.92
KRH44667	Soybean	nucleus	89.21	88.92
Bra035074.1-P	Field mustard	cytosol	88.57	88.28
VIT_04s0008g02580.t01	Wine grape	cytosol	89.69	88.27
TraesCS7B01G392600.1	Wheat	plastid	91.79	84.07
HORVU7Hr1G109770.1	Barley	cytosol, mitochondrion	85.35	65.84
CDX77882	Canola	mitochondrion	12.72	36.57
Os12t0207500-00	Rice	extracellular, plastid	15.14	27.17
Os10t0355800-00	Rice	cytosol, extracellular, plastid	17.39	25.71
Os01t0711000-01	Rice	plastid	20.13	25.61
Os06t0568200-01	Rice	nucleus, plasma membrane, vacuole	19.65	25.0
Os06t0120732-00	Rice	cytosol	6.76	25.0
CAA34003	Rice	extracellular	19.16	23.9
Os05t0553000-02	Rice	mitochondrion	20.29	22.83

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:2.40.30.20	Gene3D:2.40.50.100	MapMan:24.1.1.2.1
Gene3D:3.40.50.300	EntrezGene:4328470	InterPro:ATP-synth_a_Xtn	InterPro:ATP_synth_asu-like_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_V1-cplx_asu	InterPro:ATPase_a/bsu_AS	ProteinID:BAD27610.1	ProteinID:BAF07968.1
ProteinID:BAS77246.1	ncoils:Coil	ProteinID:EEE56418.1	GO:GO:0000166	GO:GO:0000325	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006139
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015991	GO:GO:0016020
GO:GO:0016787	GO:GO:0033180	GO:GO:0046034	GO:GO:0046961	GO:GO:1902600	InterPro:IPR023366
InterPro:IPR024034	HAMAP:MF_00309	EnsemblPlantsGene:Os02g0175400	EnsemblPlants:Os02t0175400-01	InterPro:P-loop_NTPase	PFAM:PF00006
PFAM:PF02874	PFAM:PF16886	ScanProsite:PS00152	PANTHER:PTHR43607	PANTHER:PTHR43607:SF3	UniProt:Q6EUQ9
SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01042	UniParc:UPI00003CE46B	InterPro:V-ATPase_asu
RefSeq:XP_015622986.1	:	:	:	:	:

Description

vacuolar H+-ATPase subunit A, Vacuolar proton-ATPase subunit A, vacuolar-type H+-ATPase subunit A2Similar to Vacuolar H(+)-ATPase subunit A (Fragment). (Os02t0175400-01)

Coordinates

chr2:+:4120173..4127533

Molecular Weight (calculated)

68595.3 Da

IEP (calculated)

5.176

GRAVY (calculated)

-0.201

Length

621 amino acids

Sequence
(BLAST)

001: MAFGDRITTF EDSEKESEYG YVRKVSGPVV VADGMGGAAM YELVRVGHDN LIGEIIRLEG DSATIQVYEE TAGLMVNDPV LRTRKPLSVE LGPGILGNIF
101: DGIQRPLKTI AIKSGDVYIP RGVSVPALDK DALWHFKPEK LGVGDIITGG DLYAIVNENT LMQHKVALPP GAMGKISYIA PAGQYSLQDT VLELEFQGIK
201: KEFTMLQTWP VRSPRPVMEK LAADTPLLTG QRVLDALFPS VLGGTCAIPG AFGCGKTVIS QALSKYSNSQ AVVYVGCGER GNEMAEVLMD FPQLTMTTED
301: GREESVMKRT TLVANTSNMP VAAREASIYT GITIAEYYRD MGYNVSMMAD STSRWAEALR EISGRLAEMP ADSGYPAYLA ARLASFYERA GKVRCLGSPK
401: RDGSVTIVGA VSPPGGDFSD PVTSATLSIV QVFWGLDKKL AQRKHFPSVN WLISYSKYSK ALEPHYERED PDFIDIRTKA REVLQREDDL NEIVQLVGKD
501: ALAESDKITL ETAKLLREDY LAQNAFTPYD KYCPFYKSVW MMRNIIHFNT LATQAVERAA GADGQKITYS VIKHRMGDLF YRLVSQKFED PAEGKEVLIA
601: KFQKLYDDLT AGFRNLEDEA R

Best Arabidopsis Sequence Match ( AT1G78900.1 )
(BLAST)

001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIARISGDVY IPRGVSVPAL DKDCLWEFQP NKFVEGDTIT GGDLYATVFE NTLMNHLVAL PPDAMGKITY IAPAGQYSLK DTVIELEFQG
201: IKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERNGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEDTL
601: VEKFKKLYDD LNAGFRALED ETR

Arabidopsis Description

VHA-AVHA-A [Source:UniProtKB/TrEMBL;Acc:A0A178W720]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.