Factsheet for Zm00001d015426_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053765_P003	Maize	cytosol	98.41	79.71
GSMUA_Achr1P10520_001	Banana	plasma membrane	95.23	77.13
GSMUA_Achr9P23040_001	Banana	cytosol	95.23	77.13
GSMUA_Achr11P...	Banana	cytosol	94.63	76.65
Os02t0175400-01	Rice	plasma membrane	94.23	76.33
TraesCS7D01G475900.2	Wheat	cytosol	92.25	75.45
TraesCS7A01G489500.1	Wheat	plastid	92.25	75.45
KRH46991	Soybean	nucleus	92.84	74.96
Solyc12g055800.1.1	Tomato	plastid	92.64	74.8
PGSC0003DMT400074197	Potato	cytosol	92.64	74.8
KRH44667	Soybean	nucleus	92.25	74.48
VIT_09s0054g00890.t01	Wine grape	extracellular	92.25	74.48
AT1G78900.1	Thale cress	cytosol	92.05	74.32
Bra003633.1-P	Field mustard	cytosol	91.65	74.0
Solyc06g063330.2.1	Tomato	cytosol, unclear	91.65	74.0
PGSC0003DMT400068136	Potato	cytosol	91.45	73.84
VIT_04s0008g02580.t01	Wine grape	cytosol	92.25	73.53
Bra035074.1-P	Field mustard	cytosol	91.05	73.52
Bra008385.1-P	Field mustard	cytosol	84.69	72.45
TraesCS7B01G392600.1	Wheat	plastid	93.24	69.17
HORVU7Hr1G109770.1	Barley	cytosol, mitochondrion	93.24	58.26
Zm00001d036961_P004	Maize	plasma membrane, plastid	21.67	22.38
Zm00001d046336_P001	Maize	cytosol	21.67	21.89
Zm00001d050687_P001	Maize	cytosol	9.94	21.01
GRMZM5G808402_P01	Maize	cytosol, mitochondrion, plastid	20.28	20.48
Zm00001d006403_P001	Maize	plastid	20.28	20.48
Zm00001d009488_P001	Maize	plasma membrane	21.27	19.35
Zm00001d038929_P001	Maize	mitochondrion	21.07	19.17
Zm00001d043834_P001	Maize	mitochondrion	21.07	18.63
Zm00001d015427_P001	Maize	extracellular, plastid	3.98	16.67
Zm00001d000277_P001	Maize	plastid	18.29	16.31
CDX77882	Canola	mitochondrion	5.77	13.43
Zm00001d020223_P001	Maize	cytosol	2.98	13.27

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:2.40.30.20	Gene3D:2.40.50.100	MapMan:24.1.1.2.1
Gene3D:3.40.50.300	UniProt:A0A1D6H1R5	ProteinID:AQK68821.1	InterPro:ATP-synth_a_Xtn	InterPro:ATP_synth_asu-like_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_V1-cplx_asu	InterPro:ATPase_a/bsu_AS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015991
GO:GO:0015992	GO:GO:0016020	GO:GO:0016787	GO:GO:0033180	GO:GO:0046034	GO:GO:0046961
GO:GO:1902600	InterPro:IPR023366	InterPro:IPR024034	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874
PFAM:PF16886	ScanProsite:PS00152	PANTHER:PTHR43607	PANTHER:PTHR43607:SF3	SUPFAM:SSF50615	SUPFAM:SSF52540
TIGRFAMs:TIGR01042	UniParc:UPI00084426C6	InterPro:V-ATPase_asu	EnsemblPlantsGene:Zm00001d015426	EnsemblPlants:Zm00001d015426_P001	EnsemblPlants:Zm00001d015426_T001

Description

V-type proton ATPase catalytic subunit A

Coordinates

chr5:+:89574544..89579319

Molecular Weight (calculated)

54976.8 Da

IEP (calculated)

4.968

GRAVY (calculated)

-0.138

Length

503 amino acids

Sequence
(BLAST)

001: MAYGDRVTTF EDSEKESEYG YVRKVSGPVV VADGMGGAAM YELVRVGHDN LIGEIIRLEG DSATIQVYEE TAGLMVNDPV LRTRKPLSVE LGPGILGNIF
101: DGIQRPLKTI AIKSGDVYIP RGVSVPALDK DALWEFQPKK LGVGDVITGG DLYATVFENT LMQHHVALPP GSMGKISYIA PAGQYNLQDT VLELEFQGIK
201: KNFTMLQTWP VRSPRPVASK LAADTPLLTG QRVLDALFPS VLGGTCAIPG AFGCGKTVIS QALSKYSNSE AVVYVGCGER GNEMAEVLMD FPQLTMTLPD
301: GREESVMKRT TLVANTSNMP VAAREASIYT GITIAEYFRD MGYNVSMMAD STSRWAEALR EISGRLAEMP ADSGYPAYLA ARLASFYERA GKVKCLGSPD
401: RTGSVTIVGA VSPPGGDFSD PVTSATLSIV QVFWGLDKKL AQRKHFPSVN WLISYSKYSK ALESFYEKFD PDFIDIRTKA REVLQREDDL NEIVQHSNEN
501: FYQ

Best Arabidopsis Sequence Match ( AT1G78900.1 )
(BLAST)

001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIARISGDVY IPRGVSVPAL DKDCLWEFQP NKFVEGDTIT GGDLYATVFE NTLMNHLVAL PPDAMGKITY IAPAGQYSLK DTVIELEFQG
201: IKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERNGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEDTL
601: VEKFKKLYDD LNAGFRALED ETR

Arabidopsis Description

VHA-AVHA-A [Source:UniProtKB/TrEMBL;Acc:A0A178W720]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.