Factsheet for Zm00001d020223_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050687_P001	Maize	cytosol	36.28	17.23
ATCG00480.1	Thale cress	cytosol	45.13	10.24
GRMZM5G808402_P01	Maize	cytosol, mitochondrion, plastid	45.13	10.24
Zm00001d006403_P001	Maize	plastid	45.13	10.24
Zm00001d038929_P001	Maize	mitochondrion	49.56	10.13
Zm00001d009488_P001	Maize	plasma membrane	49.56	10.13
Zm00001d043834_P001	Maize	mitochondrion	49.56	9.84
CDX98579	Canola	plastid	45.13	8.49
CDY38701	Canola	plastid	45.13	8.49
CDX99946	Canola	plastid	45.13	8.49
Zm00001d000277_P001	Maize	plastid	41.59	8.33
Solyc04g039850.1.1	Tomato	cytosol	5.31	4.32
Zm00001d053765_P003	Maize	cytosol	21.24	3.86
Zm00001d036961_P004	Maize	plasma membrane, plastid	15.93	3.7
Zm00001d046336_P001	Maize	cytosol	15.93	3.61
Zm00001d015427_P001	Maize	extracellular, plastid	3.54	3.33
Zm00001d015426_P001	Maize	cytosol	13.27	2.98
HORVU4Hr1G016830.2	Barley	cytosol, mitochondrion, nucleus	1.77	1.98

Protein Annotations

EnsemblPlants:Zm00001d020223_P001	EnsemblPlants:Zm00001d020223_T001	EnsemblPlantsGene:Zm00001d020223	Gene3D:3.40.50.300	InterPro:P-loop_NTPase	PANTHER:PTHR15184
ProteinID:ONM54521.1	SUPFAM:SSF52540	UniParc:UPI00084384A2	UniProt:A0A1D6I2Y2	MapMan:35.1	:

Description

ATP synthase subunit beta chloroplastic

Coordinates

chr7:+:100770949..100773059

Molecular Weight (calculated)

12567.4 Da

IEP (calculated)

8.503

GRAVY (calculated)

0.099

Length

113 amino acids

Sequence
(BLAST)

001: MKSERKCALV YGQMNVPPGA HVGLIVLTVA KHFRDAKGQD VLLFIDNIFC LTQVKSVIFK IRSFRHTVDP STIKFHDRLV LCMCDNSSAQ ESAERGGIEL
101: YAEVNNRGLC AIA

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.