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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • cytosol 4
  • plastid 1
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid
Any Predictor:cytoskeleton, cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
plasma membrane: 27341663
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 23508561 doi
Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck
Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG20226 Sorghum cytosol 100.0 100.0
Os06t0568200-01 Rice nucleus, plasma membrane, vacuole 98.77 98.57
TraesCS7D01G361000.1 Wheat cytosol 98.56 98.36
TraesCS7B01G265500.1 Wheat golgi, nucleus, plastid 98.56 98.36
TraesCS7A01G362000.1 Wheat cytosol 98.36 98.16
Solyc01g111760.2.1 Tomato plastid 95.89 97.49
Zm00001d046336_P001 Maize cytosol 99.59 97.39
PGSC0003DMT400068704 Potato cytosol 95.28 96.87
Solyc10g055670.1.1 Tomato cytosol, nucleus, unclear 95.07 96.66
Bra025804.1-P Field mustard cytosol 79.67 96.04
CDY01384 Canola cytosol 85.22 95.62
VIT_03s0038g02760.t01 Wine grape cytosol 95.28 95.08
CDX73218 Canola cytosol 94.25 95.03
AT1G20260.1 Thale cress cytosol 94.87 94.87
AT1G76030.1 Thale cress cytosol 94.46 94.65
CDY54328 Canola cytosol 94.46 94.65
CDX87646 Canola cytosol 94.66 94.47
Bra015797.1-P Field mustard cytosol 94.66 94.47
CDY51327 Canola cytosol 94.25 94.44
CDY31899 Canola cytosol 94.05 94.24
CDX96645 Canola cytosol 94.05 94.24
CDY29363 Canola cytosol 93.63 93.83
Bra012223.1-P Field mustard endoplasmic reticulum 89.32 92.36
VIT_18s0001g01020.t01 Wine grape cytosol, extracellular 95.07 92.05
HORVU7Hr1G087190.1 Barley plastid 98.77 91.27
PGSC0003DMT400008800 Potato cytosol 96.1 89.31
Zm00001d015426_P001 Maize cytosol 22.38 21.67
GRMZM5G808402_P01 Maize cytosol, mitochondrion, plastid 20.94 20.48
Zm00001d006403_P001 Maize plastid 20.94 20.48
Zm00001d053765_P003 Maize cytosol 25.26 19.81
Zm00001d050687_P001 Maize cytosol 9.03 18.49
Zm00001d038929_P001 Maize mitochondrion 20.33 17.9
Zm00001d009488_P001 Maize plasma membrane 20.33 17.9
Zm00001d043834_P001 Maize mitochondrion 20.33 17.4
Zm00001d000277_P001 Maize plastid 18.69 16.13
Zm00001d020223_P001 Maize cytosol 3.7 15.93
Zm00001d015427_P001 Maize extracellular, plastid 2.67 10.83
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14EntrezGene:100282598MapMan:24.1.1.2.2Gene3D:3.40.50.12240ProteinID:AQK82471.1
InterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_V1-cplx_bsuInterPro:ATPase_a/bsu_ASUniProt:B6T9C0EMBL:EU961585
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006139
GO:GO:0006810GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0015991GO:GO:0015992
GO:GO:0016020GO:GO:0033180GO:GO:0046034GO:GO:1902600HAMAP:MF_00310InterPro:P-loop_NTPase
PFAM:PF00006PFAM:PF02874PIRSF:PIRSF039114ScanProsite:PS00152PANTHER:PTHR43389PANTHER:PTHR43389:SF6
SUPFAM:SSF52540TIGRFAMs:TIGR01040UniParc:UPI000182BEAFInterPro:V-ATPase_su_B/betaEnsemblPlantsGene:Zm00001d036961EnsemblPlants:Zm00001d036961_P004
EnsemblPlants:Zm00001d036961_T004:::::
Description
Putative ATPase%2C V1 complex%2C subunit B protein isoform 1%3B Putative ATPase%2C V1 complex%2C subunit B protein isoform 2%3B Vacuolar ATP synthase subunit B isoform 1
Coordinates
chr6:+:107437936..107445192
Molecular Weight (calculated)
54064.7 Da
IEP (calculated)
4.825
GRAVY (calculated)
-0.258
Length
487 amino acids
Sequence
(BLAST)
001: MGLVKEGVDM EEGTLEIGME YRTVSGVAGP LVILDKVKGP KYQEIVNIRL GDGTTRRGQV LEVDGEKAVV QVFEGTSGID NKYTTVQFTG EVLKTPVSLD
101: MLGRIFNGSG KPIDNGPPIL PEAYLDISGS SINPSERTYP EEMIQTGIST IDVMNSIARG QKIPLFSAAG LPHNEIAAQI CRQAGLVKTL EKGKHAEGGE
201: DDNFAIVFAA MGVNMETAQF FKRDFEENGS MERVTLFLNL ANDPTIERII TPRIALTTAE YLAYECGKHV LVILTDMSSY ADALREVSAA REEVPGRRGY
301: PGYMYTDLAT IYERAGRIEG RTGSITQIPI LTMPNDDITH PTPDLTGYIT EGQIYIDRQL HNRQIYPPIN VLPSLSRLMK SAIGEGMTRR DHSDVSNQLY
401: ANYAIGKDVQ AMKAVVGEEA LSSEDLLYLE FLDKFERKFV TQGAYDTRNI FQSLDLAWTL LRIFPRELLH RIPAKTLDQY YSRDASH
Best Arabidopsis Sequence Match ( AT4G38510.5 )
(BLAST)
001: MERIKSKMGA AENNLEMEGT LEIGMEYRTV SGVAGPLVIL EKVKGPKYQE IVNIRLGDGT TRRGQVLEVD GEKAVVQVFE GTSGIDNKYT TVQFTGEVLK
101: TPVSLDMLGR IFNGSGKPID NGPPILPEAY LDISGSSINP SERTYPEEMI QTGISTIDVM NSIARGQKIP LFSAAGLPHN EIAAQICRQA GLVKRLEKSD
201: NLLEHQEDDN FAIVFAAMGV NMETAQFFKR DFEENGSMER VTLFLNLAND PTIERIITPR IALTTAEYLA YECGKHVLVI LTDMSSYADA LREVSAAREE
301: VPGRRGYPGY MYTDLATIYE RAGRIEGRKG SITQIPILTM PNDDITHPTP DLTGYITEGQ IYIDRQLHNR QIYPPINVLP SLSRLMKSAI GEGMTRRDHS
401: DVSNQLYANY AIGKDVQAMK AVVGEEALSS EDLLYLEFLD KFERKFVAQG AYDTRNIFQS LDLAWTLLRI FPRELLHRIP AKTLDQFYSR DTTN
Arabidopsis Description
ATPase, V1 complex, subunit B protein [Source:UniProtKB/TrEMBL;Acc:F4JTQ0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.